Nocardioides faecalis: KG111_05225
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Entry
KG111_05225 CDS
T09118
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nfc
Nocardioides faecalis
Pathway
nfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KG111_05225 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfc03400
]
KG111_05225 (mutM)
Enzymes [BR:
nfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KG111_05225 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KG111_05225 (mutM)
DNA repair and recombination proteins [BR:
nfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KG111_05225 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
DZR
Zn_ribbon_6
zf-C2HC_3
Motif
Other DBs
NCBI-ProteinID:
QVI59739
LinkDB
All DBs
Position
1133659..1134519
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRAGLERHVTGATITFVDVLHDRPVRRHPGGAAGFAAALTGRTIVGACRRG
KYLWLPLDNGDAILGHLGMSGQMLVQPTDAPAERHLRVRFALAGTEHGRELRFVDQRMFG
GLSVSVGGAELPGEIAHIARDPLDPAFDDDAFAARLRRRTSGVKRLLLDQGLISGVGNIY
ADEALWRARLHGERPGDRLTRKQALELLGHAREVMNAALAQGGTSFDALYVNVNGESGYF
DRSLHAYGREGEPCDRCGTPIRRVAFMNRSSYFCPRCQPVPRARRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtccgtgccggcctcgagcgccacgtcaccggc
gcgacgatcaccttcgtcgacgtcctgcacgaccgtccggtgcgccgtcaccccggcggt
gccgccgggttcgccgctgcgctgaccggccgcaccatcgtcggcgcgtgccgccgcggc
aagtacctgtggctgccgctggacaacggcgacgccatcctcggccacctcgggatgagc
gggcagatgctcgtccaacccaccgacgcccccgccgaacggcacctgcgcgtccggttc
gccctcgccggcaccgagcacggccgcgagctgcgcttcgtcgaccagcgcatgttcggc
ggcctgtcggtctcggtcggcggcgcggagctgcccggcgagatcgcgcacatcgcccgc
gacccgctcgacccggccttcgacgacgacgccttcgcggcccggctgcggcgacgcacc
tcgggcgtgaagcggctgctgctcgaccagggactgatctccggtgtcggcaacatctac
gccgacgaggcgctgtggcgtgcccggctgcacggcgagcggcccggggaccggctgacc
cgcaagcaggccctcgagctgctcggccacgcccgcgaggtgatgaacgcggcgctcgcc
cagggcggcacctccttcgacgcgctctacgtcaacgtcaacggcgagtccggctacttc
gaccgctcgctgcacgcctacggccgcgagggcgagccctgcgaccggtgcggcacgccg
atccgccgcgtggcgttcatgaaccgctcgtcgtacttctgcccgcggtgccagccggtg
ccgcgggcgcgtcggcgctga
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