Nocardioides faecalis: KG111_05805
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Entry
KG111_05805 CDS
T09118
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nfc
Nocardioides faecalis
Pathway
nfc03030
DNA replication
nfc03430
Mismatch repair
nfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KG111_05805 (holA)
03430 Mismatch repair
KG111_05805 (holA)
03440 Homologous recombination
KG111_05805 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfc03032
]
KG111_05805 (holA)
03400 DNA repair and recombination proteins [BR:
nfc03400
]
KG111_05805 (holA)
Enzymes [BR:
nfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KG111_05805 (holA)
DNA replication proteins [BR:
nfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KG111_05805 (holA)
DNA repair and recombination proteins [BR:
nfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KG111_05805 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
HAD
Motif
Other DBs
NCBI-ProteinID:
QVI60500
LinkDB
All DBs
Position
1258006..1258995
Genome browser
AA seq
329 aa
AA seq
DB search
MWKAEPMRAEDVLGRVTLVTGKEEFLGARTVDDVKATVRGYDPEAELADSPAADLTLASL
GEMAAPSLFSSIRCVVVRGLENLPEESVAGLLAYAAAPVDDVALVLVHGGGQKGSGVLTK
LRKLKTVTEHKSEELRASDFASFVANEVRRFGATIEREAADFLIEAVGRDLRSLSGAAHQ
LANDFPGERIGEAQVRRYFGGRAEAKSFAVADAAFAGRDRAALEELRWALDSGTPAVLVT
SAFAGSARGLARLVSAPRGMREADLAREVGVPPWKLRTLRDQARGWSEAGLGGAIRAVAQ
ADADIKGAASDASYALERLVLTITALRRA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggctgagcccatgcgggcggaggacgtgctgggccgggtcacgctggtcacc
ggcaaggaggagttcctcggtgcgcggacggtcgacgacgtcaaggcgacggtgcgcggc
tacgacccggaggccgagctcgccgacagccccgccgccgacctcaccctcgcctccctg
ggggagatggcggcgccgtcgctgttctcctcgatccgctgcgtggtggtgcgcgggctg
gagaacctgccggaggagtcggtcgccggcctgctggcctacgccgcggccccggtcgac
gacgtcgcgctggtgctggtccacggcggcgggcagaagggcagcggcgtgctcaccaag
ctgcgcaagctcaagacggtcaccgagcacaagtccgaggagctgcgggcctccgacttc
gcttcgttcgtcgccaacgaggtacgccgcttcggtgccaccatcgagcgcgaggccgcc
gacttcctgatcgaggccgtcggtcgcgacctgcgctccttgtccggcgccgcccaccag
ctcgccaacgacttccccggtgagcggatcggggaggcccaggtgcgccgctacttcggt
ggccgggccgaggccaagtccttcgcggtcgccgacgcggcgttcgccggccgcgaccgg
gcggcgctggaggagctgcgctgggcgctcgactccggcaccccggcggtcctggtcacc
tccgccttcgcgggcagcgcccgcggcctggcccggctggtcagcgctccgcgaggcatg
cgcgaggcggacctggcccgggaggtcggggtgccgccgtggaagctgcggacgctgcgc
gatcaggcacgcggctggagcgaggccgggctcggcggcgccatccgcgccgtcgcccag
gccgacgccgacatcaagggggcggccagcgacgcctcctatgcgctggagcggctggtg
ctcaccatcaccgcgctgcgccgggcctga
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