Nocardioides faecalis: KG111_09345
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Entry
KG111_09345 CDS
T09118
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
nfc
Nocardioides faecalis
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfc03019
]
KG111_09345
Enzymes [BR:
nfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KG111_09345
Messenger RNA biogenesis [BR:
nfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KG111_09345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
QVI57333
LinkDB
All DBs
Position
2022696..2025509
Genome browser
AA seq
937 aa
AA seq
DB search
MSQRPDPQRPDPQEPELGPAERYAAYRRNARHPVFTDFAAGYSFGLDEFQVEGCQAVEEG
DSVLVAAPTGAGKTVVGEFAVHLALETGRKCFYTTPIKALSNQKYHDLVARYGVDQVGLL
TGDTSINGEAPVVVMTTEVLRNMLYARSRTLVGLGFVVMDEVHYLADRSRGAVWEEVIIH
LPDSVSVVSLSATVSNAEEFGEWLSTVRGSTRTIVAERRPVPLFQHVMAGRRLLDLFASS
DVDAAAGFVREGAPVNEELMKLARDDWASSRLKDRRTPKGARGRQGGPGSRNVGSGRRVW
IPGRIDVIDALERKNLLPAIDFIFSRAGCDAAVKQCLDANLRLTTPEERDEAIAYVESTL
GVLPADDLQVLGYHDFLDAASRGIAAHHAGMLPAFKECVEELYLRGLVKMVFATETLALG
INMPARTVVLEKLSKWNGETHADITPGEYTQLTGRAGRRGLDIEGHAVVLWQPGMNPREL
AGLASTRTYPLRSSFRPSYNMAVNLVHSYGRHRARELLEMSFAQFQADRAVVGLARQLHK
AEDALGGYAEAAQCHLGDFMEYAALRRRVSELEKSASRARRTDRREEAAASLERLVPGDV
IVVPAGKFAGPAVIVDPGLSEQGHRPLVVTAERQGRRLAMMDFPVPVEPVARLRLPKRVD
PRNPHQRKDLAQAVREAVRGLPASVTRPRAEKAPVEEGAARAIAAARARVREHPCHGCAD
REEHSRWAERHAKLKKDADLLSARIERRTNTVARTFDRVCEVLEALGYLDADTVTDRGRG
LMRIYSDLDLVAAEALRTGLWDDLTPAELGAVLSSLVYEARRPEDGPGAVPGGVVTERID
AMVRLWSELEVLERQHRLDFLRRPDPGFAWTAYRWAQGQDLDEVITRNDQTAGDFVRQMK
QLIDFAGQIADAAAGTPVRDSARQLVGLLRRGIVAAG
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcgtcccgacccccagcgccccgacccccaggagccggagctcggccccgcc
gagcgctacgccgcctaccggcgcaacgcccggcaccccgtcttcaccgacttcgccgcc
ggctactccttcggcctcgacgagttccaggtcgaggggtgccaggcggtggaggagggc
gacagcgtgctggtcgccgcgcccacgggcgccggcaagaccgtggtcggcgagttcgcg
gtgcacctggcgctagagaccgggcgcaagtgcttctacacgacgccgatcaaggcgctg
tcgaaccagaagtaccacgacctcgtcgcccgctacggcgtcgaccaggtcggcctgctc
accggcgacacctcgatcaacggcgaggcgcccgtggtcgtgatgaccaccgaggtgctg
cgcaacatgctctacgcccgctcccgaaccctggtcgggctcgggttcgtggtgatggac
gaggtgcactacctggccgaccggtcccgcggggcggtgtgggaggaggtcatcatccac
ctgcccgactccgtctcggtggtctcgctctcggcgacggtctccaacgctgaggagttc
ggcgagtggctgtccacggtgcgcggctccacccgcaccatcgtcgcggagcggcgcccg
gtgccgttgttccagcacgtgatggccggacggcggctgctggacctgttcgcctcctcc
gacgtcgacgccgccgcgggcttcgtgcgcgagggcgcgcccgtcaacgaggagctgatg
aagctcgcccgcgacgactgggcctcctcccggctcaaggaccggcgcacccccaagggc
gcccgcggccgccagggcggtcccggcagccgcaacgtcggcagcgggcgccgggtctgg
atcccgggccgcatcgacgtcatcgacgcgctggagcgcaagaacctgctcccggccatc
gacttcatcttcagccgcgccgggtgcgacgccgccgtcaagcagtgcctggacgcgaac
ctgcggctgaccacgcccgaggagcgcgacgaggccatcgcctacgtcgagtccacgctg
ggcgtgctgcccgccgacgacctgcaggtcctcggctaccacgacttcctggacgccgcc
tcgcgcggcatcgccgcccaccacgccggcatgctgccggcgttcaaggagtgcgtggag
gagctctacctacggggcctggtgaagatggtcttcgccaccgagaccctcgcgctgggc
atcaacatgccggcgcgcaccgtggtgctggagaagctgagcaagtggaacggcgagacc
catgccgacatcacccccggcgagtacacccagctcaccggccgtgccggacgccgtggc
ctcgacatcgagggccacgcggtggtgctgtggcagccgggcatgaacccccgcgagctg
gccgggctggcctccacgcgcacctacccgctgcgctcgtcgttccggccgtcgtacaac
atggcggtcaacctggtgcactcctacggccgccaccgcgcccgcgagctgctggagatg
tccttcgcgcagttccaggccgaccgggctgtggtcggcctggcccgtcagctgcacaag
gcggaggacgccctggggggctacgccgaggccgcgcagtgccacctgggcgacttcatg
gagtacgccgcgctgcgccgccgggtctcggagctggagaagagcgccagccgggcgcgg
cgcaccgaccgccgtgaggaggccgcggcgtcgctggagcggctggtgcccggtgacgtg
atcgtggtgccggcgggcaagttcgccgggccggcggtgatcgtcgacccgggcctgtcc
gagcagggccaccggccgctggtggtcaccgcggagcgccaggggcgccgcctggcgatg
atggacttcccggtgccggtagagcccgtggcgcggctgaggctgcccaagcgggtcgac
ccgcgcaacccgcaccagcgcaaggacctcgcgcaggcggtgcgcgaggccgtgcgcggc
ctgcccgcctcggtgacccgcccgcgggccgagaaggcgccggtcgaggagggcgcggcg
cgcgcgatcgccgcggcccgggcccgggtgcgcgagcacccctgccacggttgcgcggac
cgcgaggagcactcgcggtgggccgagcggcacgcgaagctgaagaaggacgccgacctg
ctctccgcgcgcatcgagcggcgcaccaacacggtggcccgcaccttcgaccgggtgtgt
gaggtgctggaggcgctgggctacctcgacgcggacacggtcaccgaccgcggccgcggc
ctgatgcggatctactccgacctcgacctggtcgcggccgaggcgctgcgcaccgggctg
tgggacgacctcacgcccgccgagctcggcgcggtcctctccagcctggtctacgaggcc
cggcgtcccgaggacggccccggcgccgtgcccggtggggtggtcaccgagcgcatcgac
gcgatggtgcggctgtggtcggagctggaggtgctggagcgccagcaccggctggacttc
ctgcgccgcccggaccccggcttcgcgtggaccgcgtaccgctgggcccagggccaggac
ctcgacgaggtgatcacccgcaacgaccagaccgccggcgacttcgtgcgccagatgaag
cagctgatcgacttcgcgggccagatcgccgacgccgccgccggcaccccggtccgcgac
agcgcccggcagctggtcggcctgctgcgccgcgggatcgtcgccgccggctag
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