Nocardioides faecalis: KG111_16560
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Entry
KG111_16560 CDS
T09118
Name
(GenBank) PKD domain-containing protein
Organism
nfc
Nocardioides faecalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Sde0182_C
K319L-like_PKD
InlK_D3
DUF4625
Y_Y_Y
DUF5122
Bact_surface_Ig-like
Big_7
Big_9
Big_13
Motif
Other DBs
NCBI-ProteinID:
QVI58566
LinkDB
All DBs
Position
3519793..3525300
Genome browser
AA seq
1835 aa
AA seq
DB search
MTSKTPQPHPVPEWLGRYPARLAIPIIAVLVLTGLALSPTPPAAAAPGQVSFVAAASTSG
NRTAHTVRTPADVRPGDVLLLSLTTNSTNSTVTPTIAGWTPAATRDGDGIRARLWTKVAG
AQDAGANVTATTSAAAKSVVAVSAYRSTGASPTVTAVAGGSNAASTSHVSPAITAPRQGS
WLVSYWSEKSSTDTVWTAPSSVTQRGTAAATGSGKISAVWGDSAGAVPTGTAAARTATTS
TSVSRGATFAIVIDPGDLAANPPAAAFTASCDGLTCSFDASGSTDPDGDDLTYSWDFGDG
AAGTGRTAQHTYASNGQRTVRLTVDDGTHTVSTTRQVNPSAVVTAGSITHVATASTAGNR
AGHSVTVPTSVRPGDRLLLFLVLNSTSATIDANVPGWTLLDSRDGDGIRGRVWTRSATAS
DAGSVVNVPSSSYVKSTMSVAAYRSTGAAVISASAVGGANSGATSHTTPAATVLSANSWL
VSVWGEKSSTDTTWTLPSGTTSRTQAAATGNGKVSSVLGDSGAGLPVGPQAGRTATTSSA
STRSTMFTVVIDPGVDTSATNKAPVAEFATGCAGLTCELDASLSYDLDGDPLTYLWDFGD
GSSGTGVNPEHRYATPGSRTVRLTVDDGHGHTAQATATATAVLANPPPGHAGLVPDSPRT
NQPTITTGEIWDIEVVGNRVYVAGTFTSIRQPNNGTVINQSFLAAYNWSTGQVDTGFRPT
FTNGGVDAVEASPDGTKLFISGNFGTVNGVDRKAIARIDPVTGAPITSFTANANGKVNEL
AVTNSTVYAGGRFTTVNNVPRGALAALDPATGQVRADFVNNITGGIGTNGDLAVQRLKLT
HDEGRLLVVHTGRQVNGQDRYGVAIINTRTNKLTPWKTTLWEDNLQFVGGIQRAYGGDVA
PDDSYFVVVSGSGGDRPPINDTVIKFALDGDSDAKPQWISRHFDSIYSVAATEAGIYIGG
HFQWAESATAPVPWPGLDDVGYGTGQGLGAYGLGDAVVKRYHLAALDPGDGHALEWFAPS
QSYEGDKHIEATPRGLFVGGDGNTKGGYNVGRVGFFDFASVAAQNGTQTVITGPIEGRIK
PVGEAFEVTGTATAASGVQRVELEIMDRSTGRYLNDDLSTWGSTTTNTFNATLDPGTGPN
RTWRLPITMTANRELIVRARAVASNGTADNTKATKKFETFGLSDQPPNTSISGPSSPVSA
RTFTITGTATDDIGVRSVSFTLRDSNNRYLQADGTVSATYSTFRVDPDVVGATSTTWSYE
ITVPYEDEWVAQARATDSIGQADLGYADRRWIVAENGQPPTVSITQPAVMVPPTAAQTVT
VTPGQPVTFSGSATDDEALSEVWITLRNTSTGERLAADGSWGANVIAGSYRISPANLNQA
SYNWSYTTPFNLSPGTYTFTVSASDRIGLSTTSSNQGRLTLNAAIPDDSPPNGLLNTTGT
ITGGQVLRLDLAGTATDDKGVAQVKVALQERDSGRYLLPNGSLSGVFSTINAVLASPEAT
STTWTLGVDLPVQGDWAVTAYAVDTAGQQDPSTTGATARYQIYPGDRPPVMNENLLNPIE
GTTFPDGKIFVSGRAEDDQAMASVEVGIVNAAGQYMGSSGTFTSTNPSWRTAFLNSPGTP
GSNFSYTTPVIPPGAYTVRVRATDQHGFVSTVYERHATVTHPPNDPPVASFTTSCVDNVC
TFDARGSTDENATTLTYSWSFGNGSGSGPVPTRTYTTAGTYTVTLTARDEWGATASATRT
VTITVPPGNRAPVAVLNAPACSGLSCNFSAVGSRDPDTGDTVSYSWVWGDGTPASTGSAP
AHVFPAPGTYRVVLTVTDGWGVATTVDREVTITAP
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaagaccccccagcctcaccccgtccccgaatggctgggccggtacccggcg
cgactggcgatccccatcatcgccgtcctggtcctcaccggtctcgcgctttcccccact
cccccggccgccgcggcgccggggcaggtgagcttcgtggccgccgccagcaccagcgga
aaccgcacggcacacaccgtgcgcaccccggccgacgtgcggcccggtgacgtgctcctg
ctcagcctgaccaccaactcgaccaacagcacggtcaccccgacgatcgccgggtggacg
ccggcagccacccgggacggcgacgggatccgtgcccggctgtggacgaaggtcgccggt
gcgcaggacgccggcgccaacgtcaccgccacgaccagcgccgcagcgaagtcggtggtc
gcggtgagcgcctaccgcagcaccggagcgtcgccgacggtcaccgcggtggccggaggc
tccaacgcggcgagcaccagccacgtcagtccggcgatcacggccccgaggcagggctcg
tggctggtgagctactggtcggagaagtcgtcgaccgacaccgtctggaccgcgcccagc
agcgtgacccagcggggcaccgccgcggcgaccggcagcgggaagatcagtgcggtgtgg
ggcgactccgccggcgcggtcccgacggggaccgccgccgcacggaccgccaccaccagc
acgagcgtctcgcgcggcgcgaccttcgcgatcgtgatcgaccccggcgacctggccgcc
aacccgccggcggccgcgttcaccgcgtcctgcgacggcctgacctgctcgttcgacgcc
tccggctcgaccgatcccgacggcgacgacctcacgtactcgtgggacttcggcgacggc
gcggcgggcacggggcgcaccgcccagcacacctacgcgagcaacgggcagcggacggtc
cggctcaccgtcgacgacggcacccacaccgtcagcacgacccgccaggtgaacccgtcg
gcggtcgtcaccgcggggtcgatcacccacgtcgccacggcgagcaccgcgggcaaccgg
gccggccactccgtcacggtgcccacctcggtgcgtcccggcgaccggctgctgctgttc
ctcgtgctgaactcgacctccgccacgatcgacgcgaacgtcccgggctggacgctgctg
gactcccgcgacggtgacgggatccgcggacgcgtgtggacccgctctgcgaccgcgagc
gacgccggctccgtggtcaacgtccccagcagcagctacgtgaagtcgacgatgagcgtc
gccgcctaccgcagcacgggtgccgcggtgatctcggccagcgccgtgggtggggcgaac
tccggggcgaccagccacacgaccccggccgccacggtgctcagcgcgaactcctggctg
gtcagcgtgtggggggagaagtccagcacggacaccacctggaccctgccgtcgggcacg
acctctcgcacccaggccgccgccaccggcaacggcaaggtgagctcggtcctcggcgac
tccggcgcggggctccccgtcgggccgcaggccggccggaccgcgaccaccagcagcgcg
agcacccgctcgaccatgttcaccgtcgtcatcgaccccggcgtggacacctccgcgacc
aacaaggcgccggtggccgagttcgccaccggctgcgccggcctcacctgtgagctcgac
gcctccctgtcgtacgacctcgacggcgacccgctgacctacttgtgggacttcggtgac
ggcagcagcggcaccggcgtcaaccccgagcaccgctacgccaccccggggtcccggacc
gtgcggctcaccgtggacgacggccacggccacaccgcccaggccaccgcgaccgcgacc
gccgtgctcgcgaacccgccccccggacatgccggcctggtgccggactccccgcgcacc
aaccagcccaccatcaccaccggcgagatctgggacatcgaggtcgtcggcaaccgggtg
tacgtcgccggcaccttcacctcgatccgtcagccgaacaacggcaccgtgatcaaccag
tccttcctcgccgcatacaactggagcaccgggcaggtcgacaccggcttccgacccacg
ttcaccaacggcggagtcgacgcggtggaggcctcacccgacggcaccaagctgttcatc
tccggcaacttcggcacggtcaacggcgtcgaccgcaaggcgatcgcccggatcgacccc
gtcaccggcgcaccgatcacctcgttcacggcgaacgccaacggcaaggtcaacgagctc
gcggtcaccaactccacggtgtacgccggcggccgcttcaccaccgtcaacaacgtgccg
cgcggtgcgctcgccgcgctggacccggccaccggccaggtgcgcgccgacttcgtcaac
aacatcaccggaggcatcggcaccaacggcgacctggccgtgcagcggctgaagctgacc
cacgacgagggccggctgctggtggtgcacacgggccgccaggtcaacggccaggaccgc
tacggcgtcgcgatcatcaacacccgcaccaacaagctgaccccgtggaagaccaccctg
tgggaggacaacctgcagttcgtcggcggcatccaacgcgcctacgggggcgacgtcgcg
cccgacgactcctacttcgtcgtcgtcagcggctcgggcggcgaccggccgccgatcaac
gacacggtcatcaagttcgccctcgacggggacagcgacgccaagccacagtggatctcg
cgtcacttcgactcgatctactccgtcgcggcgaccgaggccggcatctacatcggcggt
cacttccagtgggccgagtcggcgacggcacccgtgccgtggcccggcctggacgacgtc
ggctacggcaccggccagggcctgggcgcctacggcctgggggacgcggtggtcaagcgg
taccacctcgccgcgctggaccccggcgacgggcatgcgctggagtggttcgccccgtcc
cagtcctacgagggcgacaagcacatcgaggccaccccgcgcgggctcttcgtcggtggc
gacggcaacaccaagggcggctacaacgtcggccgggtcgggttcttcgacttcgccagc
gtcgctgcccagaacggcacccagaccgtgatcaccggcccgatcgagggccggatcaag
cccgtcggtgaggccttcgaggtcaccggcaccgccacggcggccagcggggtccagcgg
gtcgagctggagatcatggaccgctcgacgggccgctacctgaacgacgacctgagcacc
tggggctcgaccaccaccaacacgttcaacgcgaccctcgaccccgggaccgggccgaac
cgcacctggcggctgccgatcacgatgaccgcgaaccgcgagctgatcgtgcgcgcacgg
gcggtcgcgtccaacggcacggccgacaacaccaaggccacgaagaagttcgagacgttc
gggctgtcggaccagccacccaacacctccatctccggtccgagcagtccggtcagcgca
cggacgttcaccatcaccggcaccgccaccgacgacatcggcgtgcgcagcgtcagcttc
accctgcgtgacagcaacaaccgctacctgcaggcggacggcaccgtgtctgcgacctac
agcaccttccgggtggaccccgacgtggtgggcgcgaccagcacgacctggtcctacgag
atcacggttccctacgaggacgagtgggtcgcgcaggcccgggccaccgacagcatcggg
caggccgacctgggctacgccgaccgacgctggatcgtggccgagaacggacagccgccg
acggtctccatcacccagcccgccgtgatggtgccgcccaccgcggcgcagaccgtcacg
gtgacgccggggcagccggtgaccttctccggctcggcgaccgacgacgaggcgctctcg
gaggtgtggatcacgctgcgcaacacctcgaccggcgaacgtctcgccgccgacggctcc
tggggagccaacgtgatcgccggctcctaccggatctcaccggcgaacctcaaccaggcc
agctacaactggtcgtacacgacgcccttcaacctctcccccggcacctacacgttcacc
gtctccgcgtccgaccggatcgggctgagcacgacgtcgagcaaccagggccggctgacg
ctgaacgccgccatccccgatgacagcccgcccaacggcctgctgaacaccaccggcacc
atcaccgggggccaggtgctccgcctcgacctggccgggaccgccaccgacgacaagggc
gtcgcccaggtcaaggtggccctccaggagcgggacagcggccgttacctcctgcccaac
ggcagcctcagcggggtcttcagcaccatcaacgccgtcctggcctcgcccgaggcgacg
agcaccacctggacgctgggggtcgacctcccggtgcagggtgactgggcggtgacggcg
tacgccgtcgacaccgccggccagcaggacccctcgaccaccggcgccaccgctcgctac
cagatctatcccggtgaccggcctccggtgatgaacgagaacctgctcaacccgatcgag
ggcaccaccttccccgacggcaagatcttcgtcagcggccgtgccgaggacgaccaggcc
atggcctcggtggaggtggggatcgtcaacgccgccgggcagtacatgggctcgtcgggg
accttcacctcgaccaacccgagctggcgcacggcgttcctgaacagcccggggaccccc
gggtcgaacttctcctacaccacgccggtgatccctccgggggcctacaccgtccgggtg
cgggccacggaccagcacggcttcgtgagcaccgtctacgaacggcacgccacggtgacc
catccgccgaacgacccccccgtggcctccttcaccaccagctgtgtcgacaacgtctgc
accttcgacgcccgcggctccaccgacgagaacgccaccacgctgacctacagctggagc
ttcggcaacggctccgggtccggtccggtaccgacgcggacctacaccaccgcgggcacg
tacacggtcacgctgacggcccgcgacgagtggggggccaccgcctccgccacccgcacg
gtgaccatcacggtgccgcccggcaaccgggcgccggtcgcggtgctgaacgcaccggcc
tgctccgggctgagctgcaacttctcggccgtcggctcacgcgaccccgacaccggcgac
accgtcagctacagctgggtgtggggcgacggcacgcccgccagcaccggctccgccccc
gcccacgtcttcccggcacccggcacctaccgcgtggtgctcacggtgacggacggctgg
ggggtggcgacgacagtcgaccgggaggtgacgatcaccgcgccctga
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