Nocardioides faecalis: KG111_17335
Help
Entry
KG111_17335 CDS
T09118
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nfc
Nocardioides faecalis
Pathway
nfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KG111_17335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfc03400
]
KG111_17335
Enzymes [BR:
nfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KG111_17335
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KG111_17335
DNA repair and recombination proteins [BR:
nfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KG111_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QVI58699
LinkDB
All DBs
Position
3691084..3691962
Genome browser
AA seq
292 aa
AA seq
DB search
MPELPEVEALALDLRGRLAGRAITKVHVAAFSALKTYDPPLSAIEGALVDGVHRHGKFLD
IEASGLHLVLHLARAGWVRWKDEVPALPPKPSNKSPLAVRIVLDEVDGVTGGLDITEAGT
KKSLAVYLVRDPLDVPRVATLGPDPLADDFTRERLAAILADAGRKQLKGVLRAQGTIAGI
GNAYSDEILHAARMSPYKPADSLSTDELTTLYDAVRTTLGDAVARSAGLAATELKAEKKS
NLAVHGRTGMPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtcgaagccctggccctcgacctgcgagggcggctggcgggg
cgtgcgatcaccaaggtccacgtggccgccttcagcgcgctgaagacctacgacccgccg
ctctcagcgatcgagggcgcgctggtggacggggtgcaccggcacggcaagttcctcgac
atcgaggcctccgggctgcacctggtgctccacctggcccgcgccggctgggtgcgctgg
aaggacgaggtgcccgcgctgccacccaagccgagcaacaagtcgcccctggcggtgcgg
atcgtgctcgacgaggtcgacggcgtcaccggtggcctggacatcaccgaggccggcacc
aagaagtcgctggcggtgtacctggtgcgcgacccgttggacgtgccccgggtggcgacg
ctgggccccgacccgctggccgacgacttcacccgcgaacgcctggccgcgatcctcgcc
gacgccggccgcaagcagctcaagggcgtgctgcgtgcccagggcacgatcgccggcatc
ggcaacgcctactccgacgagatcctgcacgcggcgcggatgtcgccgtacaagcccgcg
gacagcctgagcaccgacgagctcaccaccctgtacgacgccgtccgcaccacgctcggc
gacgccgtcgcccgctcggccggcctggccgccaccgagctgaaggcggagaagaagtcg
aacctcgcggtgcacgggcgcaccggcatgccgtgtccggtgtgcggcgacacggtgcgc
gaggtgtccttcgccgactccagcctgcagtactgccccacctgccagaccggcggcaag
ccgctcgccgaccggaggatgagccggctgctcaagtag
DBGET
integrated database retrieval system
