Nocardioides faecalis: KG111_17435
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Entry
KG111_17435 CDS
T09118
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nfc
Nocardioides faecalis
Pathway
nfc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG111_17435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfc03019
]
KG111_17435
03400 DNA repair and recombination proteins [BR:
nfc03400
]
KG111_17435
Enzymes [BR:
nfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KG111_17435
Messenger RNA biogenesis [BR:
nfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG111_17435
DNA repair and recombination proteins [BR:
nfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KG111_17435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
HEM4
DUF7343
HTH_53
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QVI58713
LinkDB
All DBs
Position
complement(3713158..3715332)
Genome browser
AA seq
724 aa
AA seq
DB search
MSTGPTVSSDVAAGRARAEQHLQALVGNPEARLYDDQWAAISALVHDRRRALVVQRTGWG
KSAVYFVATLLLREQGAGPTVIISPLLALMRNQIAAAERAGIRAVTVNSTNLEQWDSAHA
AIAAGEVDVLLVSPERLNNPGFRDEVLPRLAATCGLLVVDEAHCISDWGHDFRPDYRRIR
TLLAELPTGIPVLATTATANQRVTDDVADQLVSPGGGLADVLVLRGTLDRASLRLGVVRL
RTAEQRLAWLADHLAEQPGSGIVYCLTVAATQEVADYLRSRGHRVAAYSGQTEQTERLAL
EQALIDGEVKALIATSALGMGFDASLGFVVNLGAPSSPVAYYQQVGRAGRGTNLPPEGAS
VVLLPAPEDRDIWAYFSSLAFPREELVRETLAALAEHGGVMSTAALEPRVDLSRNRLETM
LKVLDVDGAVRRVRGGWEATGREWSYDAERYARVAASRAAEQQAMLEYLDTDECRMRFLR
RQLDDPEVLADPDWRCGRCDNCGGLTLSTEVSTAAVEEAADRLARPGVPIEPRKLWPTGL
PAIGVELSGKIRQPAETGRAVARLTDLGHGAALRGLFAHDPASPTGVTDGPVPDGLARAM
VAMLADWRPQVDVMVVAESERRPQLVADLAHGLSRYLGLPVVGRWAIADPGVGPDRGATN
SAQRVAAVTRRCALRLDAPDAVRGARVLLVDDRVVTGWSNTLAAAALHDAGAAAVVPLVL
GLSG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccggccccaccgtctcctccgacgtcgccgcgggccgcgcccgcgccgagcag
cacctccaggcgctggtcggcaaccccgaggcgcggctgtacgacgaccagtgggccgcg
atctccgcgctggtccacgaccggcgccgcgcgctggtggtgcagcgcaccggctgggga
aagtcggcggtctacttcgtggccacgctgctgctgcgcgagcagggcgccggcccgacg
gtgatcatctcgccgctgctggcgctgatgcgcaaccagatcgccgccgccgagcgcgcc
ggcatccgcgcggtcacggtgaactcgaccaacctggagcagtgggactccgcgcacgcc
gcgatcgcggccggcgaggtcgacgtgctgctggtgagcccggagcggctgaacaacccc
gggttccgcgacgaggtgctgccgcggctggccgcgacctgcgggctgctggtggtcgac
gaggcgcactgcatctccgactggggccacgacttccggcccgactaccgccgcatccgc
acgctgctggccgagctgccgaccgggatcccggtgctggccaccaccgccaccgccaac
cagcgggtcaccgacgacgtggccgaccagctggtctcgcccggcggcggcctggccgac
gtgctggtgctgcgcggcaccctggaccgcgcgtcgttgcggttgggcgtcgtacggctg
cgcaccgccgagcaacggctggcctggttggccgaccacctcgccgagcagcccggcagc
gggatcgtctactgcctgacggtcgcggccacccaggaggtcgcggactacctgcgctcg
cgcgggcaccgggtcgcggcgtactccgggcagaccgagcagacggagcggctcgcgctg
gagcaggcgctgatcgacggcgaggtgaaggcgctgatcgccaccagcgcgctggggatg
ggcttcgacgcctcgctcgggttcgtggtcaacctgggggcaccgagcagcccggtggcc
tactaccagcaggtcggccgtgccggccgcggcacgaacctgccacccgagggtgcctcg
gtggtgctgctgccggcgccggaggaccgtgacatctgggcgtacttctcctcgctggcc
ttcccgcgcgaggagctggtgcgcgagacgctggccgcgctcgccgagcacggcggcgtg
atgagcaccgccgcgctggagccgcgggtggacctctcccgcaaccggctggagacgatg
ctcaaggtgctcgacgtcgacggcgcggtgcgccgggtgcgcggcggctgggaggcgacc
ggacgggagtggtcctacgacgccgagcggtacgcgcgggtcgccgcgtcgcgggccgcc
gagcagcaggcgatgctggagtacctggacaccgacgagtgccggatgcggttcctgcgc
cgccagctcgacgaccccgaggtcctcgccgaccccgactggcggtgtgggcgctgcgac
aactgcggtggcctgaccctgtccaccgaggtctccaccgccgccgtcgaggaggccgcc
gaccggctcgcccgccccggtgtcccgatcgagccccgcaagctgtggcccaccggcctg
cccgcgatcggcgtggagctgtccggcaagatccgccagcccgccgagaccggccgcgcc
gtcgcccggctgaccgacctcggtcacggcgccgcgctgcgcgggctgttcgcccacgac
cccgcctcacccaccggcgtcaccgacgggcccgtccccgacggcctggcccgagcgatg
gtcgcgatgctcgccgactggcgcccgcaggtcgacgtgatggtcgtcgccgagtccgag
cgccgcccgcagctggtcgccgacctcgcgcacgggctgtcccgctacctcggcctgccc
gtcgtcggccggtgggcgatcgccgaccccggcgtcggccccgaccgcggtgccaccaac
tccgcccagcgcgtcgccgccgtcacccggcgctgcgcgctgcgcctcgacgcccccgac
gccgtccgcggcgcccgggtgctgctcgtcgacgaccgcgtcgtcaccggctggtccaac
accctcgccgccgcggccctgcacgacgctggcgccgctgccgtcgtaccgctcgtgctg
gggttgtcgggctga
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