Nocardiopsis flavescens: HUT17_00020
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Entry
HUT17_00020 CDS
T06721
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
nfe
Nocardiopsis flavescens
Pathway
nfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUT17_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfe03400
]
HUT17_00020 (recF)
DNA repair and recombination proteins [BR:
nfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUT17_00020 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_33
SbcC_Walker_B
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QKW31540
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Position
5688..6836
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AA seq
382 aa
AA seq
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MYVSHLQLADFRSYPEALVELGPGVSVFVGSNGQGKTNLVEAIGYVATLGSHRVSSDTPL
VRQGAARAIVRARVVRDERDMLVDLEINPGRANRARINRAAAGRPRDVLGILRTVLFAPE
DLALVKGDPGERRRFLDDLLVARSPRMAGVRADYDRVLKQRNALLKTASGRMFRQRSAPD
LSTLEVWDAHLAEAGAELLAARLDLVEALRPLVGDSYAGLTDSGGPAVPAYRSSLAEDGG
EPPRGRADLARALREAMAGQRDRELQRGVSLVGPHRDDLFLELGGMPAKGYASQGESWSY
ALSLKLAAFDLLRADGDDPVLILDDVFAELDTERRRRLAERVRDAEQVLVTAAVPDDIPA
ELDGARFGVREGEVRGEEVAGG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtttcccatctgcaactggccgacttccgttcctacccggaggccctcgtcgaa
ctgggcccgggcgtgagcgtgttcgtcgggtccaacggccagggcaagaccaacctggtc
gaggcgatcggctacgtcgccaccctcggcagccaccgcgtctcctccgacaccccgctg
gtccgccagggggcggcccgcgccatcgtgcgcgcccgggtggtgcgcgacgaacgggac
atgctggtcgacctggagatcaacccgggccgcgccaaccgcgcccggatcaaccgcgcc
gccgccgggcgtccgcgcgacgtgctggggatcctgcgcacggtgctcttcgcccccgag
gacctggccctggtcaagggcgatcccggggagcgccgccgcttcctcgacgacctgctg
gtggcccgctccccgcggatggcgggggtccgcgcggactacgaccgggtcctcaaacag
cgcaacgccctgctcaagacggcgtcggggaggatgttccggcagcgctcggcccccgac
ctgagcacgctggaggtctgggacgcccacctggcggaggccggcgcggagctgctggcc
gcccggctggacctggtggaggcgctgcgcccgctggtcggcgactcctacgcggggctc
accgactccggcggtcctgcggtgcccgcctaccgcagctccctggccgaggacggcggg
gagccgccgcgcgggcgcgcggacctggcccgggccctgcgcgaggcgatggccgggcag
cgcgaccgcgagctgcagcgcggggtgagcctggtgggcccgcaccgcgacgacctgttc
ctggagctgggcgggatgcccgccaagggctacgccagccagggggagtcgtggtcgtac
gccctctccctgaagctggccgcgttcgacctgctgcgggccgacggcgacgacccggtg
ctcatcctcgacgacgtcttcgcggagctggacaccgagcggcggcgccggctggccgag
cgggtccgcgacgcagagcaggtgctggtgacggcggccgtccccgacgacatcccggcg
gagctggacggggcccggttcggcgtgcgcgagggagaggtccgcggcgaggaggtcgcc
ggtggctga
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