Nocardiopsis flavescens: HUT17_00325
Help
Entry
HUT17_00325 CDS
T06721
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
nfe
Nocardiopsis flavescens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
GAF
GAF_2
GGDEF_2
GAF_3
DUF2089
Motif
Other DBs
NCBI-ProteinID:
QKW31596
LinkDB
All DBs
Position
complement(73313..75298)
Genome browser
AA seq
661 aa
AA seq
DB search
MERELNTTPSRPGDDPAGVAGQAPFLDLLLRDAPAVEYERPVLRARAQGADPEVVAALEA
AKLTALRVRSVMRDRQRRESELSALFETANDLAGMRSLDQVLRAIVERARNLLGTDIAYL
TLSDPEAGGTVMRVTSGSVSASFQQLRLGAGKGLGGLVAKTALPYVTANYFADPRFAHAE
NIDHAVREEGLVAILGVPLKMNGRDVGVLFAANRRERPFAHSEVALLSSLATHAAIAIDS
ANLIDDTRRALDELHTVNERLQRHTASVERSAAAHDRLTDLVLRGGGVREVAAAIAEVLG
GSVTVRDVTTDVTVTATPQGSVTESSHPPEPDGAVEEAVRAALASGRAVRAGNAWVASAA
AGSEPLGTLVLRGVELDETDQRVLERAAMVTALLLLIRRSVSETEHRVRGDLLNELLETP
ARDPGSLRERAALLHADLDAPHVLVVAEAPGADPGRLRSAATHVAETTGGLAGSRAGRLV
LALPGTDPRAAGRRAAEELALAAGGAPVTVGLAGPTGGPERFRPAFAEAARCVQTLRALG
REGDLATAEDLGFSGLLLGRDRDVPGFVRSALGPLLEYDERRGTVLVETLKAYFAAGGNL
SRARTALHIHVNTVSQRLERIGQLLGEDWQHPDRALELQLALHLHGLLDKGVDLLGEQPG
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgagctgaacacgaccccttcccggcccggcgacgacccggcgggcgtcgcc
ggccaggcccccttcctggacctgctgctgcgcgacgcgccggcggtggagtacgagcgc
ccggtgctgcgggcccgcgcccagggcgcggacccggaggtggtggcggccctggaggcg
gccaagctgaccgcgcttcgcgtgcggtcggtgatgcgggaccggcagcgccgcgagtcg
gagctgagcgccctgttcgagaccgccaacgacctggcggggatgcgcagcctcgaccag
gtgctgcgggcgatcgtggagcgggcgcgcaacctgctgggcaccgacatcgcgtacctg
acgctgagcgacccggaggcgggcggcaccgtgatgcgggtgacgtcggggtcggtgtcg
gcgtcgttccagcagctgcggctgggcgcgggcaaggggctgggcggcctggtggccaag
acggcgctgccgtacgtgacggccaactacttcgccgacccgcggttcgcccacgcggag
aacatcgaccacgcggtgcgcgaggagggcctggtggccatcctgggcgtcccgttgaag
atgaacggccgggacgtgggggtcctgttcgcggcgaaccggcgggagcggccgttcgcg
cactcggaggtggcgctgctgtcgtcgctggccacacacgcggcgatcgcgatcgacagc
gccaacctcatcgacgacacccggcgggcgctggacgagctgcacaccgtcaacgagcgg
ttgcagcggcacacggcgtcggtggagcggtcggcggccgcccacgaccggctcaccgac
ctggtgctgcgcggcggcggggtgcgggaggtggcggcggcgatcgccgaggtgctgggc
gggtcggtgacggtccgggacgtgaccacggacgtgacggtgacggcgaccccgcagggg
tcggtgaccgagagttcgcacccgccggagccggacggggccgtggaggaggcggtgagg
gcggcgctggcgagcggccgcgcggtgcgcgccgggaacgcctgggtggcgtcggccgcg
gcgggcagcgaaccgctgggcacgctggtgctgcgcggggtggagctggacgagaccgac
cagcgggtgctggagcgggcggcgatggtgacggccctgctgctgctgatccgccgttcg
gtgagcgagaccgagcaccgggtgcgcggcgacctgctcaacgagctgctggagaccccg
gcgcgcgacccgggttcgctgcgggagcgcgcggccctgctgcacgcggacctggacgca
ccgcacgtgctggtggtggccgaggctccgggcgccgacccggggcggctgcggtcggcg
gccacgcacgtggccgagaccaccggcgggctggccgggagccgggcggggcggctggtg
ctggcgctgccggggaccgaccccagggccgcggggcggcgtgcggccgaggagctggcc
ctggcggccgggggtgcgccggtgacggtggggctggccgggccgacgggcggcccggag
cggttccggccggcgttcgccgaggcggcgcggtgcgtgcagacgctgcgggcgctgggc
cgggagggcgacctggcgaccgccgaggacctggggttctcggggctgctgctgggccgg
gaccgggacgtgccggggttcgtgcggtccgcgctgggtccgctgctggagtacgacgag
cggcgcgggaccgtgctggtggagacgctgaaggcgtatttcgcggccgggggcaacctg
tccagggcccgcaccgcgctgcacatccacgtgaacacggtgtcgcagcgcctggagcgg
atcggccagctcctcggggaggactggcagcaccccgaccgcgcgctggagctacagctg
gccctgcacctgcacggtctcctggacaagggtgtggacctgctcggcgagcagccgggc
ggttga
DBGET
integrated database retrieval system
