Aspergillus fischeri: NFIA_013870
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Entry
NFIA_013870 CDS
T01070
Name
(RefSeq) small nuclear ribonucleoprotein (LSM8), putative
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_013870
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_013870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_013870
03041 Spliceosome [BR:
nfi03041
]
NFIA_013870
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NFIA_013870
mRNA degradation factors
5'-3' decay
Lsm complex
NFIA_013870
Spliceosome [BR:
nfi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NFIA_013870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
4591100
NCBI-ProteinID:
XP_001264594
UniProt:
A1D2Q4
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSLHSYINKKVLILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGL
YLIRGDNVVLCGEVDEAIDNDIDWSKVKGEVVKGTKNA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcactcctacatcaataaaaaagtcctcattctcactgtcgacggccgcacc
ttactagggacactcttgtcgacggatcagttgacgaatcttgtcctgctggacacgatt
gaaaggatcatccgaaccccggatgaccccgaaccgagctcgcagatcgaacacggactc
tacttgattcgaggcgacaatgtggttctgtgcggtgaagttgacgaggcgatcgataac
gatatcgactggtcgaaggtgaaaggcgaggttgtcaagggtacgaaaaacgcatga
DBGET
integrated database retrieval system
