KEGG   Aspergillus fischeri: NFIA_021920
Entry
NFIA_021920       CDS       T01070                                 
Name
(RefSeq) WD domain protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
nfi  Aspergillus fischeri
Pathway
nfi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NFIA_021920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nfi03009]
    NFIA_021920
Ribosome biogenesis [BR:nfi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    NFIA_021920
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WDR55 EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Utp12 WD40_MABP1-WDR62_2nd Beta-prop_EML DSE1_N ASA1 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_WDR41 NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_Aladin WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_RIG_1st Beta-prop_WDR19_1st RMC1_N WDR54 WD_LRWD1 DNAI3_WD Beta-prop_NUP159_NUP214 Tricorn_2nd Frtz DUF2103 RelA_RIS
Other DBs
NCBI-GeneID: 4590858
NCBI-ProteinID: XP_001265380
UniProt: A1D4Z0
LinkDB
Position
Unknown
AA seq 962 aa
MVKSYLKFEHSNTFGLVASGSSNAIWTRDDDLAGTARRTGAGRAIVGAGEEVLCWDVKKG
DLLGRWRDTSCKAQVTVITQSKTDEDVFAVGYDDGSIRIWDSRTETVIISFNGHKSAVTQ
LAFDAAGVRVASGSKDTDIIVWDLLAEVGLFKLRGHTDQVTSLHFLNLSSELLQAAGLSE
HAGFLLTTGKDSLIKIWDLATQHCIETHVAQSNGECWSLGLSPDQSGCITAGNDGELKVW
SIDESAMLEISREKVGSEGRKILTDRGTLYRNGKDRTIGISFHPRADYIGFHGSEKAIEI
WRIRSATEVQKSLARKRKRRKEKEAQRAADKEGAVAEVDNEKVDDISSAPVTEVFVPHVI
VRTGGKVRSFDWIRTKATGNLQLLASTTNNQLESYSVTTANKKKDDDDSDYNRNLAVDIP
GHRTDIRSIALSSDDRMLASASNGSLKIWNVRTQSCLRTLECGYSLCSAFLPGDKIVVVG
NKNGELEVFDIASSTLLDTIKAHDGPVWSLHVHPDGKSMVSGSADKSAKFWNFQVVQEEI
PGTKRTTPRLKLVHTRTLKVADDILSLRFSPDARLLAVALLDNTVKVFFTDSLKLFLNLY
GHKLPVLNMDISYDSKLIVTCSADKTVRLWGLDFGDCHKAFLAHEDSIMAVTFVPTNKEG
NGHNFFSASKDRVIKYWDGDKFEHIQKLQGHHGEIWALTISHSGEFIVSASHDKSIRIWQ
QTDEQLFLEEEREKELEEMYDNTLTASLEQDEDADGEKAEAVDAGKQTTETLMAGEKIME
ALDLGMADLEVMRQWRAVKASQPNAAPPARNPLYMALGNISAEQHVLSVVQKVPAAALQD
ALLVLPFSKVPALFTFLNIWANRGWNIPLTCRVLFFMLKTHHRQIIASKMMRPMLDSIRS
TLRRVLTRQKDEMGFNLSALQIIGQQVREASTKDYVDEETWEQEHPQVTGTGKKRAFVQI
AS
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggtgaagtcatatttgaaattcgagcattcgaatacgttcgggctcgttgcgtcgggt
tcgtcgaatgcgatttggacccgagacgatgatctcgctggtactgcgcgccgcacaggc
gctggaagggccattgtcggtgccggtgaggaggttctctgctgggacgtcaagaaaggc
gacttacttggacggtggcgcgacacatcctgcaaagcgcaggtgaccgtgatcactcag
agtaagaccgatgaggacgttttcgctgtcgggtacgatgatggaagtattcgtatctgg
gactcgagaacagagacggtgatcatttcgttcaacggccacaaatccgccgttactcaa
ctcgccttcgatgctgccggtgtgcgcgtcgctagtggctcgaaggacacagatattatc
gtgtgggacttgctagcggaagttgggcttttcaagctgcgcggacacaccgaccaagtc
acctcgctccatttcctcaatctgtcttccgaattgctacaagccgctggactgagcgaa
cacgcgggatttctgcttactaccggcaaggactccttaatcaagatctgggacctggct
acgcaacactgtattgagacacatgtggcccaatcgaacggcgagtgctggagcttgggc
ctctcccccgaccaaagcggctgtatcaccgcgggaaacgatggagaactcaaggtttgg
tcgattgatgaaagcgctatgctcgagatctcgcgagagaaagttggttctgaagggcgc
aaaattctgacggacagagggacgctttatcggaacggcaaggatcgaacgattggtatc
agctttcacccgcgtgctgactatatcggcttccatggctcggagaaggcaatagaaatc
tggcgcatccgttcagcgacggaggtacaaaagagcttggccaggaagcgtaagagaaga
aaggagaaggaagcccagcgggctgcagacaaggaaggggcagtggcagaagttgacaat
gagaaggtcgacgatatttcgtctgcgccggttactgaagtctttgttcctcacgtcatt
gttcgcactggcggcaaggtccgttccttcgactggattcgaacaaaagctacaggcaat
ctccagcttctggcttcgaccacgaacaaccagttggaatcgtacagcgttaccactgcg
aataaaaagaaggatgatgatgactccgactacaatcgcaacctggccgttgacatcccg
ggtcaccgtaccgacatcagatctattgccctgagttccgacgaccgaatgctggcttct
gcctctaacggcagcttgaagatttggaacgttcgtacgcagagctgcctgcgtacattg
gaatgcggctattccctgtgctctgccttcctccctggtgacaagatcgttgtggtcggt
aataagaacggcgaactggaagtctttgacattgcatcctcgactctgctggatacgatc
aaggcgcacgatggaccagtctggtctctgcacgtccatcccgatggcaaatcgatggtc
agtggtagtgctgacaagtccgcgaagttttggaacttccaggttgtccaggaagaaata
cccggcaccaaacgaactacaccacgcctcaaactggtacatacaagaaccctcaaagtt
gcggatgacatcctcagtctccgcttctcacctgatgctcggttgcttgcagtcgccctc
ttagacaacaccgtcaaggtcttctttaccgactctctaaagctcttcctcaacctttat
ggccacaagcttcctgtcctcaacatggacatttcctatgacagcaagctcattgttact
tgttccgcggacaagacagttcgactatggggtctggactttggtgattgccacaaagca
ttcctggcccatgaggacagtatcatggctgtcactttcgttcctaccaacaaggagggc
aacggccacaacttcttcagcgcgagcaaggaccgtgtcatcaaatactgggatggtgac
aaatttgaacacatccagaaactccaaggccatcacggtgaaatttgggctctgactatc
agccattccggcgaattcatcgtcagcgccagccatgacaagagcattcgcatctggcaa
cagacagatgaacagctctttttggaagaagagcgcgagaaagagctcgaagagatgtac
gataacacactgacagcgtctctagagcaggatgaggatgcagacggagagaaggccgag
gcagtcgatgctgggaagcagaccaccgaaacgctcatggccggtgaaaagatcatggaa
gctctggatttgggcatggcagacctcgaggtgatgcggcaatggcgcgccgtcaaagcc
agccagccaaacgcggcaccaccggctcgcaaccctctatacatggcactgggtaacatc
tcagccgagcagcatgtgcttagtgtggtccagaaggtccctgctgctgcactccaggac
gctttgctcgttctgccgttctccaaagtccctgcgcttttcactttcctcaatatctgg
gccaaccggggctggaatattcctctcacgtgccgtgttctgttcttcatgctgaagacg
caccatcgtcagattattgccagtaagatgatgcgacctatgctggatagtatccggtca
actctgcgtcgggtccttacccgtcaaaaagacgagatggggttcaacctttctgccttg
cagatcataggccagcaagtgcgggaagcgagcaccaaggactacgtcgatgaggaaacg
tgggagcaggagcacccacaggtgacgggtacaggcaagaagcgggcatttgtccaaatt
gcttcttag

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