Aspergillus fischeri: NFIA_021920
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Entry
NFIA_021920 CDS
T01070
Name
(RefSeq) WD domain protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
nfi
Aspergillus fischeri
Pathway
nfi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NFIA_021920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfi03009
]
NFIA_021920
Ribosome biogenesis [BR:
nfi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
NFIA_021920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
DSE1_N
ASA1
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
Beta-prop_WDR41
NBCH_WD40
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
WD_LRWD1
DNAI3_WD
Beta-prop_NUP159_NUP214
Tricorn_2nd
Frtz
DUF2103
RelA_RIS
Motif
Other DBs
NCBI-GeneID:
4590858
NCBI-ProteinID:
XP_001265380
UniProt:
A1D4Z0
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MVKSYLKFEHSNTFGLVASGSSNAIWTRDDDLAGTARRTGAGRAIVGAGEEVLCWDVKKG
DLLGRWRDTSCKAQVTVITQSKTDEDVFAVGYDDGSIRIWDSRTETVIISFNGHKSAVTQ
LAFDAAGVRVASGSKDTDIIVWDLLAEVGLFKLRGHTDQVTSLHFLNLSSELLQAAGLSE
HAGFLLTTGKDSLIKIWDLATQHCIETHVAQSNGECWSLGLSPDQSGCITAGNDGELKVW
SIDESAMLEISREKVGSEGRKILTDRGTLYRNGKDRTIGISFHPRADYIGFHGSEKAIEI
WRIRSATEVQKSLARKRKRRKEKEAQRAADKEGAVAEVDNEKVDDISSAPVTEVFVPHVI
VRTGGKVRSFDWIRTKATGNLQLLASTTNNQLESYSVTTANKKKDDDDSDYNRNLAVDIP
GHRTDIRSIALSSDDRMLASASNGSLKIWNVRTQSCLRTLECGYSLCSAFLPGDKIVVVG
NKNGELEVFDIASSTLLDTIKAHDGPVWSLHVHPDGKSMVSGSADKSAKFWNFQVVQEEI
PGTKRTTPRLKLVHTRTLKVADDILSLRFSPDARLLAVALLDNTVKVFFTDSLKLFLNLY
GHKLPVLNMDISYDSKLIVTCSADKTVRLWGLDFGDCHKAFLAHEDSIMAVTFVPTNKEG
NGHNFFSASKDRVIKYWDGDKFEHIQKLQGHHGEIWALTISHSGEFIVSASHDKSIRIWQ
QTDEQLFLEEEREKELEEMYDNTLTASLEQDEDADGEKAEAVDAGKQTTETLMAGEKIME
ALDLGMADLEVMRQWRAVKASQPNAAPPARNPLYMALGNISAEQHVLSVVQKVPAAALQD
ALLVLPFSKVPALFTFLNIWANRGWNIPLTCRVLFFMLKTHHRQIIASKMMRPMLDSIRS
TLRRVLTRQKDEMGFNLSALQIIGQQVREASTKDYVDEETWEQEHPQVTGTGKKRAFVQI
AS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcatatttgaaattcgagcattcgaatacgttcgggctcgttgcgtcgggt
tcgtcgaatgcgatttggacccgagacgatgatctcgctggtactgcgcgccgcacaggc
gctggaagggccattgtcggtgccggtgaggaggttctctgctgggacgtcaagaaaggc
gacttacttggacggtggcgcgacacatcctgcaaagcgcaggtgaccgtgatcactcag
agtaagaccgatgaggacgttttcgctgtcgggtacgatgatggaagtattcgtatctgg
gactcgagaacagagacggtgatcatttcgttcaacggccacaaatccgccgttactcaa
ctcgccttcgatgctgccggtgtgcgcgtcgctagtggctcgaaggacacagatattatc
gtgtgggacttgctagcggaagttgggcttttcaagctgcgcggacacaccgaccaagtc
acctcgctccatttcctcaatctgtcttccgaattgctacaagccgctggactgagcgaa
cacgcgggatttctgcttactaccggcaaggactccttaatcaagatctgggacctggct
acgcaacactgtattgagacacatgtggcccaatcgaacggcgagtgctggagcttgggc
ctctcccccgaccaaagcggctgtatcaccgcgggaaacgatggagaactcaaggtttgg
tcgattgatgaaagcgctatgctcgagatctcgcgagagaaagttggttctgaagggcgc
aaaattctgacggacagagggacgctttatcggaacggcaaggatcgaacgattggtatc
agctttcacccgcgtgctgactatatcggcttccatggctcggagaaggcaatagaaatc
tggcgcatccgttcagcgacggaggtacaaaagagcttggccaggaagcgtaagagaaga
aaggagaaggaagcccagcgggctgcagacaaggaaggggcagtggcagaagttgacaat
gagaaggtcgacgatatttcgtctgcgccggttactgaagtctttgttcctcacgtcatt
gttcgcactggcggcaaggtccgttccttcgactggattcgaacaaaagctacaggcaat
ctccagcttctggcttcgaccacgaacaaccagttggaatcgtacagcgttaccactgcg
aataaaaagaaggatgatgatgactccgactacaatcgcaacctggccgttgacatcccg
ggtcaccgtaccgacatcagatctattgccctgagttccgacgaccgaatgctggcttct
gcctctaacggcagcttgaagatttggaacgttcgtacgcagagctgcctgcgtacattg
gaatgcggctattccctgtgctctgccttcctccctggtgacaagatcgttgtggtcggt
aataagaacggcgaactggaagtctttgacattgcatcctcgactctgctggatacgatc
aaggcgcacgatggaccagtctggtctctgcacgtccatcccgatggcaaatcgatggtc
agtggtagtgctgacaagtccgcgaagttttggaacttccaggttgtccaggaagaaata
cccggcaccaaacgaactacaccacgcctcaaactggtacatacaagaaccctcaaagtt
gcggatgacatcctcagtctccgcttctcacctgatgctcggttgcttgcagtcgccctc
ttagacaacaccgtcaaggtcttctttaccgactctctaaagctcttcctcaacctttat
ggccacaagcttcctgtcctcaacatggacatttcctatgacagcaagctcattgttact
tgttccgcggacaagacagttcgactatggggtctggactttggtgattgccacaaagca
ttcctggcccatgaggacagtatcatggctgtcactttcgttcctaccaacaaggagggc
aacggccacaacttcttcagcgcgagcaaggaccgtgtcatcaaatactgggatggtgac
aaatttgaacacatccagaaactccaaggccatcacggtgaaatttgggctctgactatc
agccattccggcgaattcatcgtcagcgccagccatgacaagagcattcgcatctggcaa
cagacagatgaacagctctttttggaagaagagcgcgagaaagagctcgaagagatgtac
gataacacactgacagcgtctctagagcaggatgaggatgcagacggagagaaggccgag
gcagtcgatgctgggaagcagaccaccgaaacgctcatggccggtgaaaagatcatggaa
gctctggatttgggcatggcagacctcgaggtgatgcggcaatggcgcgccgtcaaagcc
agccagccaaacgcggcaccaccggctcgcaaccctctatacatggcactgggtaacatc
tcagccgagcagcatgtgcttagtgtggtccagaaggtccctgctgctgcactccaggac
gctttgctcgttctgccgttctccaaagtccctgcgcttttcactttcctcaatatctgg
gccaaccggggctggaatattcctctcacgtgccgtgttctgttcttcatgctgaagacg
caccatcgtcagattattgccagtaagatgatgcgacctatgctggatagtatccggtca
actctgcgtcgggtccttacccgtcaaaaagacgagatggggttcaacctttctgccttg
cagatcataggccagcaagtgcgggaagcgagcaccaaggactacgtcgatgaggaaacg
tgggagcaggagcacccacaggtgacgggtacaggcaagaagcgggcatttgtccaaatt
gcttcttag
DBGET
integrated database retrieval system