Entry |
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Name |
(RefSeq) vacuolar morphogenesis protein AvaB, putative
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KO |
K20183 | Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:nfi00001]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
NFIA_027030
04148 Efferocytosis
NFIA_027030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:nfi04131]
NFIA_027030
Membrane trafficking [BR:nfi04131]
Endosome - Lysosome transport
Tethering complex
Hops complex
NFIA_027030
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1038 aa
MLSAFTARPLVELKQRDKSKIESVLAYGDRLLVGLNNGSLRIYRVNEVCNGRQAEDDHHG
EGEEGGSTMNNGDSSRPATMSSGTNLKPKQSELLRELEKFSRYKVEQLVLIKEAKLLISL
SGGYVSIHDLQTYEFQEQLTRTRGATTFAVTSNIVHDPETGVPSIVSRLAVAVKRKILLW
TWRDMELENDTAEMSLVSGIKTLTWVSGTKLVAGLSSNFVMVDIETTNVTDLVGPGSIGG
LPGQETGRLAGVGVASMSYIGIGGTAPKPLATRLSEGQVLLAKDINTQFIDIEGNSLGRR
QIPWSHAPSDIGYSYPFLLALHDSSKGVLEVRNPETLSLLQSIPLPSASLLHIPQPSISL
AHAGKGFLVASDRTIWRMEALSYDTQIDALVEKGYLDEAISLANMLEDALLTDKYGRLRS
IKLDKAQTLFSLRKYLESMELFTEISAPPEAVIRLYPRVIAGDLSSIPEEHEGSEAGTTD
SQPRPEQEQKQDTVPATSDDAALARTQANTPSVRSLLRTKTDDTSDAGSVRSKLMEDSRS
DKRLEGKDLKLAVRELQAYLADVRRRFQRFLNPDGSLKMDPTADVVKDEFTESVMKLLEM
DKDQGEDDFGERLRAKAKLVDTTLFRVYMYATPSLAGSLFRIANFCDPDVVIEKLEESGR
QNDLIDFLYGKKMHRQALELLKKFGQAEVDGETASQLQGPKRTVGYLQNLSPEHIDLILE
FAEWPIREKPDLGMEIFLADTENAETLPRHQVLGFLKGIDVRLAVRYLEHVIGELNDMTP
DLHQSLLSLYLDRLEEQKNKEWEFASEEDRTDWRNKLLDMLRTSSQYSPAKILDRLNRDD
PEFFEARAIVFSKMGQHRQALEIYVFKLEDYTKAEEYCNHLHKTEDATSKETTAIQNIAL
PDFEGEKPSIYLTLLSLYLSPPHGYKPRYGPALEVLAKHGSRLPPNSALELIPETLPVKE
LQFYFKGRMRAATSILNESRIVANMQKSQSIKTQAQLLVGEGGDVKASRSRHVTITEERI
CGICHKRLGGSVINVFPE |
NT seq |
3117 nt +upstreamnt +downstreamnt
atgttatccgctttcacggctcggccactcgtcgagctcaaacaacgcgacaaatcaaaa
atagagtcggtccttgcatacggggaccgtcttctggtaggattgaacaatggcagcttg
cgaatatacagggtcaatgaggtctgcaatggcaggcaagcggaggacgatcatcatggc
gagggcgaagagggtggaagtacgatgaataacggggacagcagcaggcctgcgaccatg
agctccgggacgaacctaaagcctaagcaaagcgagctacttcgtgagttggaaaaattt
tccagatataaagtggaacagttggtgttgatcaaggaggccaagctgctcatctcgctt
tccggcggatacgtatcgattcacgacttacagacctacgagttccaagagcagcttacg
aggaccagaggtgcgactacctttgctgtgacttcgaacatagttcacgaccccgagact
ggcgtcccgtcgatcgtatcgcgccttgccgtggcggttaagagaaagatcctgctgtgg
acatggcgcgatatggagttggagaacgatacggcggaaatgagcctggttagtggcata
aaaacactcacgtgggtttctggaacaaaactcgtcgctgggttgagctcgaatttcgtc
atggtggacattgagaccacaaatgtcacggacctcgttggaccgggcagcatcggtggc
ctacccggacaagaaacagggcgactggccggtgttggcgttgctagtatgagctatatt
gggattggcggaactgctcctaaaccgctggctacacgcctaagcgaagggcaagtatta
ctggcgaaggatatcaacactcaatttatcgacatcgagggcaattccttgggaagaagg
cagataccttggagccatgccccctccgacattgggtactcgtatccttttctgctggca
ctgcatgactcttcgaagggagtgctggaggttcgaaatcctgagaccctgagcttactc
caatcgataccattaccatcggcgagtcttctgcatatccctcagccctcaatcagcttg
gctcacgctggcaagggattcttggttgctagtgaccgaaccatctggagaatggaggct
ttgagttacgacactcaaattgatgctcttgtggaaaagggatatttggatgaggcgatc
agcctcgctaatatgcttgaggatgctcttctcacggacaaatatggtcgtctacgctcc
atcaaacttgacaaggcgcagacgttgttctctctccgaaaatacctcgagtcaatggag
ctcttcacggagatctcggctcctcccgaggccgtcattcggctttacccgcgagttata
gcgggcgatctttcgtccattccggaagagcatgaaggatcggaggccggtacgacggat
agtcagccaagacccgaacaggagcagaagcaagacacagtccctgctacgtcggatgac
gctgcgcttgccagaacgcaggcgaatacaccctcagtgaggtccctccttcgaacgaag
acagatgataccagcgatgcaggtagcgtccgcagcaagctcatggaagattctcggagc
gacaaacgccttgaaggaaaagacctcaagcttgctgttcgtgaactccaagcgtacctg
gcggatgttcgccggcgattccagcgattcctgaatcccgatggctcgctcaagatggac
cctacagctgatgtggtgaaagatgaatttacggaatccgtcatgaagttgcttgaaatg
gacaaagatcaaggcgaggatgactttggtgagaggcttcgagccaaagctaaactcgtc
gacacaacgctcttccgagtttatatgtatgcaacgccgtccctggctggctccctcttc
cgtatcgccaatttctgtgacccggacgtggttattgagaagttagaggagagtggacgc
caaaacgaccttattgactttctctacgggaagaagatgcatcgtcaagccctggagctc
ttgaaaaagtttggccaggctgaagtggacggagagactgcgtctcaacttcagggtccg
aaaagaactgttggctatctgcagaacctgtctcccgaacatattgatttgatactagaa
tttgctgagtggccgatacgtgaaaagcctgacctgggcatggaaattttccttgcggat
acggagaatgcggaaacattgcctcgtcatcaagtactaggttttctgaaagggattgat
gtccgtctggctgttaggtatcttgagcatgtcattggagaattgaatgacatgactccg
gatctccaccagagccttctcagcctttatttggatcgcttggaggaacaaaagaacaaa
gaatgggagttcgccagtgaagaagacaggaccgattggcggaacaagctgctggacatg
ctaaggacaagctctcagtattcaccagcgaagattcttgaccgtcttaatcgagatgat
cctgagttcttcgaggcaagagcaatcgttttcagtaagatggggcaacacagacaagcg
ctagagatatacgtgttcaaactcgaagactataccaaggcagaagagtattgcaatcac
cttcacaagaccgaagacgccacgagcaaagagacgacggctatacaaaatatagccctt
ccggattttgagggagaaaagccttccatatacctaacacttttatctctttacttgtct
ccgccgcatggatacaaaccacgatatggacccgcgctagaggtgctcgcaaaacatgga
tcccgccttcctccaaactcggctcttgaactgatcccggaaacactgccagtcaaggaa
ttgcaattctatttcaaaggccgtatgcgggcggcaacttctatactcaatgagtccaga
attgtggccaacatgcaaaagtcgcagagtatcaagacacaagcgcagctcttggttggc
gagggtggtgacgtgaaggcatcgaggtcgaggcatgtcacgatcacagaagaaaggatc
tgtggaatttgccataagcgacttggtggaagtgtgatcaatgtcttccccgagtaa |