KEGG   Aspergillus fischeri: NFIA_027220
Entry
NFIA_027220       CDS       T01070                                 
Name
(RefSeq) LSM domain protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
nfi  Aspergillus fischeri
Pathway
nfi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NFIA_027220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfi03019]
    NFIA_027220
   03041 Spliceosome [BR:nfi03041]
    NFIA_027220
   03032 DNA replication proteins [BR:nfi03032]
    NFIA_027220
Messenger RNA biogenesis [BR:nfi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     NFIA_027220
Spliceosome [BR:nfi03041]
 Complex A
  U1 snRNP components
   Sm proteins
    NFIA_027220
  U2 snRNP components
    NFIA_027220
 Complex B
  U1 snRNP components
    NFIA_027220
  U4/U6.U5 tri-snRNP components
    NFIA_027220
 Complex C
  U2 snRNP components
    NFIA_027220
DNA replication proteins [BR:nfi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     NFIA_027220
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 4588159
NCBI-ProteinID: XP_001261545
UniProt: A1DCT8
LinkDB
Position
Unknown
AA seq 95 aa
MSGRAGGGGARKTLLAPIHFIFKLLQQRTTVSIWLYEQLAFRIEGKIRGFDEFMNLVIDD
AVEVRMATKTDEEKRRPLGQILLKGDNVSLIQAVQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtccggtcgagcaggcggtggaggtgctcgcaagacgctgcttgcgccaattcacttc
atcttcaagcttctgcagcaacgaacgacggtttctatttggctctacgagcagttggcg
ttccggatagagggaaagattaggggattcgatgagttcatgaacttggtcattgatgat
gcggtggaagtgagaatggctacaaagactgatgaggagaagcggagacccctgggtcaa
attctgcttaagggcgacaacgtgtctctcatccaagcggtccagtga

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