Aspergillus fischeri: NFIA_029560
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Entry
NFIA_029560 CDS
T01070
Name
(RefSeq) DNA repair protein Rhp26/Rad26, putative
KO
K10841
DNA excision repair protein ERCC-6
Organism
nfi
Aspergillus fischeri
Pathway
nfi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NFIA_029560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfi03036
]
NFIA_029560
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_029560
Chromosome and associated proteins [BR:
nfi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
NFIA_029560
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
NFIA_029560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
4589124
NCBI-ProteinID:
XP_001262421
UniProt:
A1D9P3
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MDHSVKNEGDGSTEIEVVETPQRTEGLDPSNTAEVATAPDSKQQEDPSAVTDEVSRLREL
QADIRDQDDLERDISRQADRLLMEQADERDKKRLEKTTLEKEKLEAQILKLHQRLSQPVG
TSARVRLENELSNLESRNASLENDLKEIQQRIDDRHEGLEAGTQATGTGRMPNESRRDYL
IRTGKITPFSRMGAGPNEGPLASLHDALIDAEDERDEDEALEQLKDRSAVSHRNLVRPGF
DFDDESTDTSIAQTRPSKRRKLEGGARRKKAGIKQEDSDSMAADEGNELSEDNDESADYV
ASEEQESLLEDEEEFFPDGKPERPVAHKKGKKPGDEMEDFSGLDDGDERLYQSRLQSWVS
RRSAARKRASKALQAKEEHGNTIDEQASTEEDEWFLPHPTVPDVSYDNGYRLPGDLNPYL
FDYQKTGVQWLWELYQQKVGGIIGDEMGLGKTIQTIAFLAGLHYSKKLDGPVIVVCPATV
MKQWVNEFHRWWPPFRVSILHTSGSGMVNIRSESSREDALLAQTYSSSSRGFTSNQKAAR
KVVKRVVEEGHVLVTTYSGLQTYSHFLIPVEWGCAILDEGHKIRNPNTSITIHCKELRTP
HRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAA
KCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKPQRMAYESFLKSEEMESILK
GRRQILYGVDILRKICNHPDLQNHKLQSHQLGYGNANKSGKMQVVKSLLELWRDTGHKTL
LFAQHRIMLDILEKFVRSLSGFNHRRMDGTTPIQNRQTMVDEFNNDPNIHVFLLTTKVGG
LGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVSVYRLMTAGTIEEKIYHRQIF
KQFLTNKILRDPKQRQTSFQLSDLYDLFALGDEKPGATETSKLFQEAQVTFQGDGDGNTQ
QPTKAEDASSDMQAEKNGISKVVGVSSVERYQGESEQPSDQEKGAGGVKSESRIMEGIFA
RSGVHSALEHDQIVNGKRVVRADPKIIEAEAKRVAAEAAEELRRAGEAARSVPIGTPTWT
GQFGVAGRPEERPLPSAFGGRSSTARRTAAGPSSASILANLSARTPSSRSATNSPAPSRT
PTGVDFMTMIRDYILSQGGAVYTQMLIDHFNRYCTTPQRSAEFKEMLKTIAVLEKGGRNG
RGRWSLKPEFAKVK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagcgtgaagaacgagggggatggctccactgaaattgaagtggtcgagaca
cctcagaggaccgagggattagatccctccaataccgccgaggtggcgacagcgcctgac
tcaaagcagcaagaggatccctctgcagtgaccgacgaagtaagccgtctacgagagctc
caggccgatatacgcgatcaggatgaccttgaaagggacatatctcgtcaggccgacagg
ttgctcatggagcaagccgacgaacgcgacaagaagaggttggagaagaccactctcgaa
aaagagaaactcgaggcccagattcttaaactccatcagcgtctgtcgcagccagttggc
acgtctgctcgagtccggttagagaacgagttgagcaatctagaatctcgcaacgcctcg
ctagagaatgacttgaaagaaatccaacaacgtattgacgacaggcatgagggtctcgaa
gcaggtactcaggcaaccgggacagggcgcatgccaaatgaatctcgaagagattatctt
atccgaaccgggaagataacgcctttttctaggatgggcgcaggcccgaatgagggtcct
cttgccagccttcatgacgctctgattgatgccgaggatgaacgtgacgaggacgaggcg
ttggagcaactgaaagatcgctcagctgtttcacacaggaatctcgtccgacccggattc
gactttgacgatgagagtaccgatacaagtatcgcacaaactcggccaagcaagagacga
aagctggagggtggtgcacgccggaagaaggccggtatcaagcaagaggactccgattcc
atggcagcagatgaaggtaatgagctttctgaagataatgacgagtcggcagattatgtg
gcatctgaagaacaagaatcattgctggaggacgaagaagaatttttccctgacggaaag
ccagagcgacctgtagctcacaaaaaggggaagaaacctggggatgaaatggaagatttc
agcggattggacgacggcgacgagagactttatcaatcgagactgcagagctgggtgagt
cggagaagcgccgctcgaaagcgtgcttctaaggcgctgcaagcaaaggaagagcatggg
aataccattgatgagcaggcctcgaccgaagaggatgaatggttcctgcctcatcctaca
gtaccagatgtgtcttatgacaatggatatcgcttacctggggatctcaatccttacttg
tttgactaccaaaaaaccggggtgcaatggctatgggagctataccagcagaaagtggga
gggatcatcggtgatgagatggggttggggaaaacgattcaaacaatagctttcctagct
ggactgcattacagcaagaaactggacggtcctgtgattgtggtatgccctgctacagtt
atgaagcagtgggtcaacgaattccatcgctggtggccaccttttcgtgtttccatcttg
cacacgtccgggagtggcatggttaatatccggagcgagagcagcagagaggatgctctc
ctagctcagacctattcttctagttcgcggggattcaccagcaaccagaaggcagcaagg
aaggttgttaagcgtgtggtggaagaaggccacgttttggtcactacctattctggatta
caaacatactctcattttctgattccagtggaatggggttgtgcaattcttgatgaaggt
cataagattcgaaacccgaacacttctatcaccatccattgcaaggagcttcggactccg
cacaggatcatcctctcgggtacccctatgcagaataacttgaccgagctttggtcgctt
ttcgattttgtgttcccgatgcgccttggaacgttagtgaactttcggaaccaattcgaa
ttccctatccggcaaggcggatatgcgaatgcttctaatctgcaagtgcagacagctgcc
aagtgtgcagagacgctcaaggacgccatcagcccatatcttctgcagcgcttcaagatc
gatgtggctgcggatttgcccaaaaagaccgagcaggtgctcttttgcaagttgaccaag
ccacagaggatggcatatgaatcattcctgaaatctgaagagatggaatccatcctcaag
ggacgcaggcagattctctatggagttgatatactgcgcaaaatatgcaatcacccagat
ttacagaatcataagctgcaatcgcatcaactgggctatggaaatgcgaacaaatctggc
aagatgcaggttgtcaaatctctattggagttgtggagagacaccggccataaaacccta
ctttttgcccagcatcgaatcatgctggatatccttgagaagttcgtcaggtcactgtct
gggttcaaccatcggcgtatggacggcaccacacccatacagaaccggcaaaccatggtt
gacgagtttaataatgacccgaatatacatgtcttcctactcacgacaaaggttggaggg
ctgggagtgaatcttacgggtgcggatagagtcatcatctacgatccagattggaaccca
tcgacagacgtgcaggcccgggagcgagcatggcgactgggtcagaagcgcgatgtcagc
gtctaccgcttaatgaccgctggaacaatcgaggagaagatatatcatcgacagatcttc
aaacaattccttaccaataagatcctcagagaccccaaacagcgccagacttcctttcag
ttgagcgatttgtatgacctattcgcgctcggggacgagaagccaggtgccacggagacg
agcaaactctttcaagaagctcaggttacatttcagggagacggtgacggcaatactcaa
cagcctaccaaagccgaggacgcctcatctgacatgcaagccgaaaagaacggcatcagc
aaagtagtgggtgtctcgtccgtggagagatatcagggcgagtcggagcagcccagcgat
caggagaaaggggctggaggcgttaagtcagagtcacgcatcatggaaggcattttcgct
cgctctggcgtacactcggctttggagcacgaccagattgtcaacggcaaacgggttgtc
cgagcagaccccaagatcatcgaggcggaggccaagagggtagctgccgaggccgccgag
gagctgcggcgagctggtgaagcagcacggtctgttcccattgggactcccacctggaca
ggtcaatttggagtcgcagggaggccggaggaaagacctctcccttcagcatttggcgga
cgaagcagtactgcgcggcgaacggcggccggcccctcgtcagcgagcattctggctaac
ctctccgcacggacaccgtcgtcccggagcgccacgaacagccctgcaccgtccaggact
cccactggcgtggatttcatgacgatgattcgagactacatcttgtcgcagggtggagcc
gtttacacacagatgctgatcgaccacttcaaccgttactgtaccacaccccagcgatcg
gccgagtttaaggaaatgcttaagacaattgccgtgctcgaaaagggtgggcgaaacggg
cgaggacgatggtcgctgaaacccgaattcgccaaggtgaaataa
DBGET
integrated database retrieval system
