Aspergillus fischeri: NFIA_034440
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Entry
NFIA_034440 CDS
T01070
Name
(RefSeq) CCR4-NOT transcription complex, subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_034440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_034440
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NFIA_034440
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NFIA_034440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
EAD9
Motif
Other DBs
NCBI-GeneID:
4593054
NCBI-ProteinID:
XP_001265773
UniProt:
A1CYQ6
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MTSRKTQQEIDKTFKKVAEGIQTFEGIYEKIRSTSNPTQRDKLEENLKREIKKLQRFRDQ
IKSWASGNEVKDKGPLLEQRRAIETCMEQFKAVEKEMKTKAYSKEGLSAASRLDPKEKEK
LEACDFLSTCVDELQLKIEAMEAEEETLHVQMKKGKKDITKTNRLSDLSRILERHKWHVN
KLELLLRALQNGAVETSQVVDLKESIKYYVDDGHNVDYCGEDETLYDDLNLGEDTEAQFG
MVGDNDRVSSQDTQSIQEDEPEVKAKSSKADASGLRRPSAQMKSPLPVLATLHPPTSTNA
TSGMKPAPPPTRPPGETLKYASAAAAAAASDKNGVGIAPLPPPPGTSPAYTAAIPVSRAS
STASPVVSSVQPVSKAVATATEEPGGHGRSKTPALSPSAAATPAAASASNTVPSTPAMDK
ANAAAAKEQPATANGETAKEDEQRDESIYHLPPGLQDLIQSFEITKSRAANSASSSSPSV
QRLLAASLATCPEPADAEKPRHYRPSNPYNTPLYYPQEPLAIFDDPRLYDTGRIDTDTLF
YLFYYRQGSYQQYLAAKALKNQSWRFHKQYQTWFQRHEEPKNITEDYEQGTYRFFDYEST
WMNRRKADFKFIYKYLEDEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccgcaaaacgcagcaagagatcgacaagaccttcaagaaggtcgcggaaggc
atacagacatttgagggcatctatgaaaagatccgctcaacatcgaatcctacccagcga
gataagctggaggagaacctgaaacgagagatcaagaagctacagcgattccgcgatcag
atcaagtcatgggcttccggtaatgaggtcaaagacaaagggccgctgctcgagcagcgc
agagcaatcgaaacttgtatggagcagttcaaagccgtggaaaaggagatgaagaccaaa
gcgtattccaaggaaggcctttccgctgcgtcgcgactcgatcccaaagaaaaagaaaaa
ctcgaagcgtgcgacttcctatcgacctgcgtggacgaacttcaactgaagatcgaggcg
atggaggccgaagaggagaccctccacgtgcagatgaagaagggcaagaaggatatcacc
aagacaaatcgtttatcggacctctcgcgaatactggagcgacataagtggcacgtcaac
aaactcgagttgctgctacgagcccttcagaacggcgcggtcgaaaccagccaggtggtg
gatctgaaggagagtatcaagtactacgtggatgatggacacaatgtcgattattgcgga
gaagacgagacactctatgacgatctcaatctgggcgaagataccgaggcgcagtttgga
atggttggggacaacgatcgcgtttcgtcgcaggacacacaatcgatccaggaggacgag
ccggaagtgaaggcgaaatcgtcgaaagctgacgctagtgggctccgccggccatcagcg
cagatgaagtcacctttgccagttctcgcaacacttcaccctccaacatccacaaacgcc
acctctggcatgaaacccgcccctcctccaactcgtccccccggcgagactctcaaatac
gcgtcagcagcggctgccgcagcagcgagcgacaaaaacggtgtcggtattgcccctctg
cccccaccgcctggcacgagccctgcctataccgccgccatcccagtttcgagagcgtca
tccacagcatcgccagttgtgtcttcggtccaaccagtatcgaaagcggtagcgaccgcc
accgaagagcctggtggacacggtcggtccaagactccagctctcagccccagcgcggcg
gcgacgcctgcagcggccagtgcttcgaatacggtgccctctactccagcgatggataag
gcgaacgccgcggctgccaaggaacagccagcgacagccaacggcgagacagccaaggaa
gatgagcagcgtgacgagtcgatataccatctgcctcccgggctgcaggatttgatccag
tcatttgagatcaccaagagccgcgcggcgaacagtgcttccagctcgtcaccgtcggtc
cagcggctgctcgcagcatcactggcgacttgcccggagcctgccgatgcagagaagccc
cgtcattaccgaccctcgaatccttacaacacccctctctactacccgcaagaacccctc
gccatattcgatgatcctcgtctgtatgacactggacggatcgataccgatacgcttttc
tacttgttttactaccgtcagggaagctaccagcagtacctggcggccaaggcgctcaag
aaccagagctggcgcttccataaacagtaccagacctggttccaacgccatgaggagccg
aagaacatcaccgaggactatgaacagggtacatatcgattctttgattacgagagtacc
tggatgaaccggcgcaaggcggatttcaaatttatctacaagtatctggaggatgaatta
taa
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