| Entry |
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| Name |
(RefSeq) 3' exoribonuclease family protein
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| KO |
| K12586 | exosome complex component RRP43 |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:nfi00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_048370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:nfi03019]
NFIA_048370
Messenger RNA biogenesis [BR:nfi03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NFIA_048370
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
411 aa
MAPAAASTAAPSAPPSLSLPPSQFARLQPHAYLLAHLSPPPSSNQPSIRANGRATSQFRV
TSANTGSLTHTNGSAVVRIGDTAAVCGVRAEILHTDDIASWSVSRASAPASMNKRRKLID
TSEKPTVAASDDNDDEDDESHIQDLNLLVPNLSLSTGCAPGFIPGAPPSALAQSLSHQIL
SLLHSTRLVRAEDMRIWYQPPNLGAEELERHNEDEQMDVDAQEGDASAKSPEIKAFWVLY
IDVMIISLAGNPFDAAWAAVLAALRDTKLPKAWWDVDNEMVVCSEAVSEAHKLSLRGMPV
ASSFCVFEADAASGWRKVIIPDAEEERKIEESGRKGIQRRWILADPDGYEESLSQERICI
VVDKENAGQGKTVIVKMEKNGGWAADTRELKQLVDISAQRWDDMKRILDSC |
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| NT seq |
1236 nt +upstreamnt +downstreamnt
atggctcccgctgcagcatcgacagctgcaccgtcagctccgccatccctctcactgcca
ccatctcaatttgcccggctccaacctcacgcctaccttcttgcccatctatcacctcct
ccctcaagcaatcagccctctattcgagccaatggccgtgctacctcccagttccgcgtt
acttctgcgaacacaggctctttaacacatacgaacggcagtgccgtggtaagaatcggc
gacactgcggcggtctgcggggttcgcgctgagattcttcataccgatgacattgcctcg
tggagtgtatcgcgagcatcggcacctgcctctatgaacaagcggcggaaattaattgat
acctctgagaagccgactgtggcagccagcgatgacaacgatgatgaggacgacgaatca
catatccaagatcttaatttgctcgtgccgaacctttcactcagcactggctgcgcacct
ggatttatccctggcgctccaccctcggcgctggcgcagtcgctgtcacatcagatctta
tcactcctacatagcacccgcttagtgcgcgcagaggatatgcgaatctggtatcagccg
ccgaacttgggagcagaggagctggaacggcataatgaggatgagcagatggatgtggat
gctcaagagggcgatgcgagtgccaagagcccagaaatcaaagcgttctgggtgctgtac
atagatgtgatgatcatctcgttagcgggcaatcctttcgatgctgcctgggccgctgtt
ctggctgcacttcgggatacgaaattgcccaaggcatggtgggacgtcgataacgagatg
gtggtgtgctcggaagctgtttctgaggcgcacaaactgtctttgcgaggtatgcctgtc
gctagctcgttctgcgtcttcgaggcagatgcagcttctgggtggagaaaggtcattatt
cccgatgctgaagaagagaggaagattgaggaaagtggcaggaaaggcatccagcgaagg
tggatcctcgctgaccccgatggatatgaggagagtttgagccaggagaggatttgtatc
gtggtcgacaaagagaacgcgggacaagggaagacagtgattgtgaaaatggagaagaac
ggcggatgggcagcggacactagagagctgaagcagctggttgacatctccgcgcaacga
tgggatgatatgaaacggatccttgatagctgctga |
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