Aspergillus fischeri: NFIA_059370
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Entry
NFIA_059370 CDS
T01070
Name
(RefSeq) nuclear mRNA splicing factor, putative
KO
K12830
splicing factor 3B subunit 3
Organism
nfi
Aspergillus fischeri
Pathway
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_059370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfi03021
]
NFIA_059370
03041 Spliceosome [BR:
nfi03041
]
NFIA_059370
03036 Chromosome and associated proteins [BR:
nfi03036
]
NFIA_059370
Transcription machinery [BR:
nfi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
NFIA_059370
Spliceosome [BR:
nfi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
NFIA_059370
Complex B
NFIA_059370
Complex C
U2 SnRNP specific factors
NFIA_059370
Chromosome and associated proteins [BR:
nfi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
NFIA_059370
TFTC complex
NFIA_059370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
4584997
NCBI-ProteinID:
XP_001258481
UniProt:
A1DP63
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MATTSNMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIY
SQDVFGIIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALD
VGYENPIFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRKWADPVDRTASM
LFQVPGGADGPSGVLVCAEDSITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKM
RGAFFFLLQTEDGDLFKVTIDMVEDDSGQLTGEVKRLKIKYFDTVPIASNLLILKSGFLY
VASEAGNHHFYQFEKLGDDDEETEFSSENFPADPSVPYEPVFFRPRGAENLNLVETLNSL
NPLIDSKIVNLNEDDAPQIYTVSGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRADEFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGI
RHILADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMS
GTVTCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMS
MADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKQVKLFRVSVKGQTAV
LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSIEKL
DNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDSKARNGETNVLP
PEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVPFSSQDDETFLVVG
TAKDMIVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAGIGSTLR
VYDLGMKQLLRKCQAPVVSKTIVGLQTQGSRIIVSDVRESVTYVVYKYQENVLIPFVDDS
VSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKVSEEADEDGSGAHLIHERGYLHGTPNR
LDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQL
ASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI
SDMRTRVAY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacttcgaacatgttcatgtattccctgacgatccagcctccgactgcgatc
acgcaagctattctgggccagtttgcagggactaaggagcaacagatcgtgacggcgtca
gggtcgaagctcacgattcatcgtcccgatccgactcagggcaagattacaccaatctat
tcccaggatgtcttcggtatcatccgttctctggcagcctttcggctggctggaagcagt
aaagattatataatcattggttccgactcgggacgtatcacgatcattgaatacgttccc
tcccagaatcggttcaaccgtatccatcttgagaccttcggcaagtccggcgtccgtcgt
gtcgttcctggtcaataccttgcggtcgatccaaaaggtagagcttgtttaattgcctct
gtggagaagaataagctcgtttacgttctgaatcggaactcgcaggccgagctcacgatt
tcgtcccctctggaggcccacaagccgcagacagtggtctttgcgatgacggctctggat
gtcggctacgagaatcccatctttgcggccctcgaggttgactattcggaggcggatcag
gatccaactggtcgagcgtacgaagagtctgaaaaactgcttgtgtattatgaacttgat
ctcggtctgaatcatgttgttcgcaagtgggccgatcctgttgaccgcacggcatctatg
ctgttccaggtgccgggaggtgccgatggtcccagtggtgtcttggtatgtgcagaggat
agcattacctaccggcactcaaaccaagatgcattcagagtcccgattcctcgacgcatc
ggtgcaaccgaaaaccccgagcgcaagcgctctatcgtcgccggtgtcatgcacaagatg
aggggtgctttcttcttccttctgcagactgaagatggcgatctgttcaaggttaccatc
gatatggtggaggatgacagcggacaactgactggcgaggttaaaaggttgaagatcaaa
tattttgatacagtccctatcgcatccaatctgttgattctaaagagtggtttcctttac
gttgccagtgaagcaggaaaccatcacttctaccaattcgagaagctgggagacgacgac
gaagagactgaattcagcagtgaaaactttcctgcggatccctctgttccctatgagccg
gtgttcttccgaccgagaggagcggagaacctcaacctcgtcgagacactcaactctctc
aaccctttgatcgatagtaagattgtgaatcttaacgaggacgatgctcctcaaatttac
actgtgtccggcactggcgcccggagcagcttcaggaccctcaagcacggtctggaagtg
tctgagatcgtggaatcggagctccccagtgtaccttctgctgtttggactaccaagttg
actcgtgccgatgagtttgacgcttacattattctttctttcgcaaacggtactttggtt
ctcagcatcggtgagacagtcgaagaagttaccgataccggctttctttccactgcacct
actttggctgttcagcagctcggtgaggattcgctgattcaggttcacccgaggggcatt
cgccatatccttgcagaccggcgtgtcaatgagtggcctgctcctcaacatcgttcgatc
gtcgccgctgcgacaaatgagcgtcaggtagcggttgccctcagctcaggtgaaatcgtg
tacttcgagatggatgccgatggaacgctcgctgaatacgatgagagacgccagatgtct
ggtacagtaacatgcctcagtttaggcgaggtgcctgaagggcgtgtgagaagttctttc
ttggctgtcggatgtgacgactctactgtccgcattctgagcttggatcccgactcgacc
ttggagaataagtcagtccaggctcttacctcggctccatcagcgttgaacatcatgtca
atggccgattcaagctcaggaggtacgacactgtacttgcacattggcctctactccggt
gtttacctccgaactgttctcgacgaggtgactggtgagctttccgatactcgtacccgt
ttcctgggagccaagcaagtcaagctattccgtgtttctgtgaagggacaaacggccgtt
ctcgcgctcagctcccgaccatggctgggctactccgacatccagacaaaaggtttcatg
ctcaccccgttggattacgtgggcttggaatggggctggaatttctccagtgagcagtgt
gttgaaggcatggttggtatccaggcacagaatcttcggattttctctatcgagaagttg
gacaacaacatactgcaggagtcaattcctctttcaaacacgccccgtcgtatgcttaag
catccagaacagccattgttctatgttattgagtccgacaacaatgtcctatcgccggct
acgagagccaggttgatcgaagattccaaggcgcgtaatggcgagacaaacgttcttccg
cccgaagatttcggctatccacgggctacaggtcactgggcgtcttgcattcaaatcgtc
gatccactggatgccaaagccgtgatttcgacgattgaactcgaggagaacgaggccgcc
gtcagcatggcagcggtacccttctctagccaggacgatgaaaccttcctggtggtggga
acagccaaggatatgattgtcaatcctccctcatcagcgggaggtttcatccacatttac
aggttccaagaagatgggaaggagctggagttcattcacaagacgaaggttgaagagcca
cctcttgctctcctcggattccagggacgtcttcttgccggcatcggctctacccttcgg
gtctatgacctgggaatgaaacagctgctccggaaatgtcaggctcccgtggtgtcgaag
acgattgttgggctccagacacaaggtagccggattattgtcagcgacgttcgcgaaagc
gtgacgtatgtcgtatacaagtaccaggagaacgtcttgattcctttcgttgatgattcc
gtctctcgctggacgacgagcaccaccatggtagactacgagactgttgccggtggtgac
aaatttggtaacctctggctcgtgcgctgtcctaagaaggtctcggaggaggcggatgag
gatggatcgggagcccatctgattcatgagcgcggttacctgcatggcacaccgaatcgc
ctggacctgatgatccacacctacacacaggatattccgaccagcttgcacaagacacaa
ctcgtggcaggtggacgggacatccttgtgtggaccgggtttcagggtacaattggcatg
cttgtgccttttgtgagccgcgaggatgtggactttttccagaacctagagatgcaacta
gcatcacagtgcccacccctcgctggacgggatcatctcatctatcgcagctattatgca
ccagtcaaaggtgtgattgatggagatttgtgcgaaatgtatttcttactgcctaatgac
acgaagatgatgattgcagcggaactggatcgttccgttagggagattgagcggaagatc
tcggatatgcgaacgagggtggcgtactaa
DBGET
integrated database retrieval system
