Aspergillus fischeri: NFIA_068310
Help
Entry
NFIA_068310 CDS
T01070
Name
(RefSeq) antiviral protein (Ski3), putative
KO
K12600
superkiller protein 3
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_068310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_068310
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
NFIA_068310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_22
TPR_2
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_1
TPR_12
TPR_11
TPR_6
ARM_TT21
HrpB1_HrpK
DUF4192
Motif
Other DBs
NCBI-GeneID:
4590205
NCBI-ProteinID:
XP_001263559
UniProt:
A1D7G8
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MSTKSALKAVRIALDSRDFEDAAEKAKAVVKQEPQNYHANVFLGLALDKLNKNEESERAY
LAATRAKSDDKTAWQGLINLYEKQGGFKLDAYHEAALRLGQIFAEVDDKHRCQDVVDKYI
KFVKKQGTRSQYKKALELHLPTSPLYVYLEGRIPHPSHTYLRLIEMTESEEKEFINREIG
ERRTRLGARIDHVTMEVKREAFKRGELEQLYRGIIDWTHDDQVRRTYEEKLLQRAYDILI
VLPPTEKAEKRAEVLQAARDMVIIKHPFELAWKIVLEWQDVQSFSEWDLNFLKDFIEFFP
EDGLTKILKGFLASDLSPFPKETKETKESTPTEEETENGNGDNHELAVQDRLLMMVEGLE
ASRSSVVANRIMGELYLSLEEYDSVVDVARKGLSNITDLARLTGVSLVDTTDCLKTLLAN
SLIYYQIPRHHPEAKEIFEEILQRKPTSTACLLGIGLILKVDEDYAEAVNFLERALERDP
SNLKIRGELSWCKALNGDLETGLHGLQDVLAELQDIESPNREFKSEILYRIGYCQWDLDP
SPTARKDRNGAYASFLGSIQSNINFAPAYTSLGIYYADYKKDKTRARRCFHKAFELSASE
IEAAERLARTFADQKEWDLVEAVAQRVVDSGKAKPSPGSKRRGYSWPYAALGTVQMNKQQ
YAQSIVSFQAALRISPGDYHSWVGLGESYHHSGRYIASAKAFDHAQQLESALSPDEREHI
WFARYMLANVKRELGEFEDAISRYEDVLKFRPNELGVTIALLQTLTESSWKSLESGLYND
SVELARNAIVVAASLAKERVDIFNLWKAVGDACSMFTYVKGKASKFPDQEVKALLTTQVE
PSAFDIFAEIDELDQGCLSLLDEDSDTISPSDKCIYASILAYKRAIHVSAQDVHAQAVAW
YNLGWAEYRALRCVQVHSGNKGKKPTRRFLKTAMRCFKRAIELEAGNSEFWNALGVATTN
MSPKVAQHAFVRSLHLNERSAQAWTNLGTLYLIHNDIQLANEAFTRAQSTDPDYSLAWVG
QGFLALLFGDPHEARGLFEHAFDISNSSSALPRRQYTLTLFDRLLSDSSASNEISQLIQP
LFALLQLSSQDPSNLQFMHLTALMAERIGELSDAETSLHVVCSGVEAEYEVSESSSSLSR
YAQSNADMARVLLARQEFEQAVEKAEIALTLSGEEDAEKFDPDANRKLRLSAHLTAGLAH
YYLKSMDNAIDMFRDALQEADNAPEVVCLLAQVLWAKGGDEERTVARQQLFDCMEEHPDH
VGAVSLLGTIALLDDDKDVFEAVASDLQNMITRDEIDIHDRTRLTKLLTAISTLGLTEDS
QIPEDLRRHGEATAAVMRSPGQPQGWQELATASQELYPAEMAVDRALRSVPPRSNLDAVD
LCEAYAQTGKAGDAIKAIMVAPWKQCGWEELKYAVSELV
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaaatcggctctgaaggcagtgcgcattgcgctggactccagggattttgaa
gatgctgccgaaaaagccaaagcggtggtgaagcaagagccccaaaactatcatgcaaac
gtcttccttggcctagcgctggataaactaaacaaaaatgaagaatcggagcgcgcatat
cttgcagcaactcgagcaaaatccgacgacaagacagcgtggcagggattgatcaatctc
tacgagaagcagggaggctttaagctagatgcttatcatgaggcagctctgagactcggg
caaatattcgccgaagttgacgacaagcaccgttgccaggatgtcgtggacaaatatatc
aagttcgtaaagaaacagggcactcgttcgcaatataagaaggccctcgaactacacctc
ccaacgagtccgctttatgtctacctcgaaggacggataccacatccttcccatacatac
ctccgcctcatagaaatgacagaatccgaagaaaaggagtttattaatagagaaattgga
gagcgaaggacccgactcggtgcgagaatcgatcatgtaaccatggaggtgaaaagagag
gctttcaaacgtggggagcttgagcagctatatcgtgggatcatagattggacccatgat
gaccaagttcgacgtacctacgaagaaaagcttctccagcgagcctatgatatactgatt
gttctcccgccaaccgagaaggccgaaaagcgtgctgaggtcttgcaagctgctcgcgac
atggtcatcattaaacacccctttgagctggcctggaagattgtacttgagtggcaagac
gttcaaagcttctcagagtgggacctcaatttcctgaaggacttcatcgaattttttcca
gaagatggacttacgaagattctgaaaggcttcttagccagtgacctctccccctttccg
aaggagacgaaggagacgaaggaatctacaccaactgaggaagagactgagaacggaaac
ggcgataatcacgagctggctgtacaggatcgcttgttaatgatggtggaaggcctcgaa
gcatctcgctcctctgtcgtcgcaaaccgcatcatgggtgagctttatttgtcgctggaa
gaatacgatagcgttgtggatgtcgcgcggaagggtctctcaaatattacagatctcgcc
agactgactggggtaagcctagtcgacactactgactgcctaaaaactctactggcgaat
tctttgatctactaccagatccctcggcatcacccggaagctaaagaaatcttcgaagag
attctgcagagaaaaccaacatccacagcctgtctgctgggcattggattgattctcaag
gtcgacgaagattatgctgaagccgtcaacttcttggagcgtgctctagagcgtgaccca
tctaacctcaagatcaggggcgagctttcgtggtgtaaggctctcaatggtgaccttgag
actggtctgcatggtcttcaggatgtgctcgccgagttacaagacatagagtcgccaaat
cgcgaatttaagagcgagatcctttaccgtataggttattgtcaatgggatcttgatcca
tcgccaaccgcgcgcaaggatcgcaatggtgcttatgccagtttccttggatccatacaa
tccaacatcaactttgcccctgcatacaccagcttgggtatctactatgcggactataaa
aaggacaaaacacgagcacgcaggtgcttccacaaggcgtttgaattatccgcgtccgaa
atcgaagctgctgaacggctcgcgaggaccttcgcagaccaaaaggaatgggatctggtt
gaagccgtggctcagcgcgtcgttgattcgggcaaagcaaagccttcaccgggctcgaag
agaaggggctatagctggccatatgccgctttgggtactgttcaaatgaacaagcagcag
tatgctcaaagcatcgtctcgtttcaagcagctctgagaatctcaccaggcgactaccac
tcgtgggttggccttggagaaagctaccatcactctgggagatatattgcctctgcgaaa
gctttcgatcatgctcagcaattagaatcagctctttcacccgatgaaagagagcatatt
tggttcgcaagatacatgctcgccaatgtaaaacgggagctcggtgaatttgaagatgcc
atctcacgctatgaggatgttttgaagttccgaccgaatgagcttggggtgactatagcg
ttgcttcagaccctcacagaaagttcttggaagagcctcgaatccggcttgtacaatgac
tctgttgaactggcgcgcaacgccatagtcgttgcagcatcgcttgcgaaggaacgtgtg
gacattttcaatctgtggaaggccgttggtgacgcctgctctatgttcacttacgtcaaa
ggaaaggcgagcaagttcccagatcaggaggtgaaggcgctacttacaactcaagttgag
ccctcggctttcgatatattcgccgaaatagacgagcttgaccaaggttgtttgtcgctt
cttgatgaggatagtgacaccatcagtccgtcagataagtgtatatatgcctcaattctc
gcatacaagagagctattcatgtctcggcgcaagatgtacatgcccaagcagtcgcctgg
tacaatctgggatgggcagaatacagggctctgagatgtgtccaggtgcattctggcaac
aagggcaagaagccgacacgccggttcctgaagacagcaatgcgttgcttcaagagagcg
attgaattggaagccggcaattcggagttttggaacgccctgggtgtggcaactacaaat
atgagcccgaaggttgcccaacatgcttttgtgagaagtttgcatttaaacgagagaagc
gcacaagcgtggacaaacttagggacgctttacctcattcacaatgatattcaactcgcc
aatgaagctttcacgcgcgcgcaatccaccgatccggactactctctggcctgggttggc
caaggattcctggctttgctatttggggacccacatgaagcaagaggtctttttgagcat
gccttcgacatctccaactcctcatccgcattgccgaggcgccagtacacgctcaccttg
ttcgaccgcctcctctcagactcttcagcatcgaatgagatatcacagctcattcagccg
ttgtttgcgctcctgcaactttcctctcaagacccgtccaatttacagtttatgcatctt
accgctctcatggccgagagaattggcgagctttcagatgcggagactagcttgcacgtc
gtctgttcaggtgtcgaggcggagtatgaggtgtctgagtcgagctcgtcgctctctaga
tacgcacagtcgaatgcagacatggcccgtgttcttcttgcacgccaagaatttgagcaa
gcagtagagaaagcggaaattgctcttaccctgtctggtgaagaagacgcggagaaattc
gacccggacgcaaacagaaaactacgtctgtcagctcatctcactgctggattggcgcat
tattacttgaagtcaatggacaacgcgatcgacatgttccgagacgccttgcaagaggcg
gataatgcaccggaggtggtatgtctcctagcacaggttctgtgggccaagggtggtgat
gaggagcggaccgtggctcgtcagcagctgtttgactgtatggaagaacaccctgaccat
gttggagcggtgtcacttttgggaacgattgcgctactagatgacgacaaggatgtcttt
gaagcagttgcttcagatcttcagaacatgatcaccagagatgagattgatatccacgac
cggactaggttgactaagctgttgacggcgatctctactttgggcctgactgaggactcg
caaattccagaggacctcagacgccatggagaggccacggctgccgtcatgagatcgcca
ggtcagccacaaggctggcaggagctagcaacagcatctcaggaactgtatcccgcggag
atggctgttgacagagcactgcgaagtgttccaccacggagcaatctggatgctgtcgac
ctctgtgaagcgtatgcacagactggcaaggcaggtgatgccatcaaggcgattatggtg
gcaccatggaagcaatgtggctgggaagagctcaagtatgctgtgtcagaattagtctaa
DBGET
integrated database retrieval system
