Aspergillus fischeri: NFIA_071340
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Entry
NFIA_071340 CDS
T01070
Name
(RefSeq) transcription elongation factor SPT6, putative
KO
K11292
transcription elongation factor SPT6
Organism
nfi
Aspergillus fischeri
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfi03021
]
NFIA_071340
03036 Chromosome and associated proteins [BR:
nfi03036
]
NFIA_071340
Transcription machinery [BR:
nfi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NFIA_071340
Chromosome and associated proteins [BR:
nfi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
NFIA_071340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
Spt6_S1
HHH_7
SPT6_acidic
Tex_central_region
HHH_9
HHH_3
SH2
S1
B12-binding
Motif
Other DBs
NCBI-GeneID:
4590506
NCBI-ProteinID:
XP_001263860
UniProt:
A1D8B9
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MSARDFVEGEAMLDDEENENEEEQEEDYDGEVREGAGTVNHYNDSSEEEEEDDDDEEAAR
AIREGFIVDEDEEIEERAERRREKRKRRREEREREDEHLDEEDLELIGELNPAFQSAAAA
ESKFKRLKRGHKDHRQASQGIDDIFNSDEDEEAAGDYGRPSHRRPMHDEMKDFIEEDVFT
DDELEREREDLEIARPAKRGVTGLGATDAAGLDENALEDMRAAFGDGNEYLFALEMEEQE
EEQEEDQEKHLDLKDVFEPSQLAERMLTEEDNQIRLLDEPERHQLARKPYRNLVLTEEQF
REEAAWISNLMLLKKRIEPELREPFQRSVAKVLEFLVTDDWEVPFIFQHRKDYMIHATKV
PVDGAPADGDTSQYTVKAEKLLNMTDLWDIFDHDLKFRALVEKRNAIQKTYDNLQSLFSV
NDSVVQDMLSTAVTMEELQDVQDYVHFQYASQLRDINLMNGEANGDTHRRKATGKSFFER
VRNGKAYSLVRAFGITADAFAQNALKEGRRQYTEDPAERPEEMADSFIDNDFSNASHVLK
AAKALFAEEIVMSPKMRKVIRQAYYMNGAVDCFRTEKGLRRIDEQHPYYEFKYLRNQQLS
DIARQPELYLRMLKAEEEGLVEVKVRFENFDHFRQRLYPDIESDNYSEIADVWNRTRREV
LDMALGKLERLINRSVKENIRQECENHVAKECREAFSQRLDQAPYKPKGMVLGTVPRVLA
MSTGTGIVGRDPIHWAYVEEDGRVLENGKFVDLSIGDRDRSISDGKDVEALIELLERRRP
DVIGVSGMSPETRKLYKLLTELVEKKDLRGATYTDERDEEISDPLEVVIVNDEVARLYQH
SERAKKDHPSFGPLTHYCVALAKYLQSPLKEYASLGRDIVSIQFKRGQQLVAQELLLKQL
ETALVDMVNLVGVDINEAVTDTATANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELL
GVNAQYPAMGVKVWNNCASFMFIDFENADPDADPLDNTRVHPEDYDIARKMAADALELDE
EDIKAETDENGPGAIVRKLFRDEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQ
QPYEELRKQFALLSTDDVFTMLTGETSDTLAEGMVVPMSIKRITDDHIDGKLDCGVDVLV
PESELTDRYDIPVRALYSLHQTLPAKVLFLNKKSFLCNVSLREEQVSRPAPRPRDHMRGE
WDDRQEAKDREMLQEKTQSGGRVMRVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSSKG
PDHLAVTWKVADGIFQHIDVLELDKENEFSVGRTLKVGGRYTYSDLDDLIFNHVKAMAKK
VDEMMLHEKYQEGSKDATYSWLNTYTKANPRRSAYAFCIDPKHPGYFLLCFKAGENAQLH
SWPVKVIPQGYELQRNPYPDMRALCNGFKLLFTNMQAGKRR
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcgcgatttcgtagaaggtgaggctatgctggacgatgaggagaatgagaat
gaggaggaacaggaggaagactacgacggcgaagttcgtgagggtgctggcaccgtgaat
cactataatgactcgagtgaagaggaagaggaggacgatgatgacgaggaggcagctcgt
gcaatccgcgagggttttattgtcgacgaggacgaagagatcgaagaacgcgccgagcgc
aggcgcgagaagaggaagcggcgtcgagaggagcgtgagcgcgaagatgagcatctcgat
gaggaagatctagagctcatcggagagttgaatcctgcttttcagtccgccgcagctgcc
gagtccaaattcaaacgtctcaagcgtggtcacaaagaccatcggcaagcgtctcaaggc
atcgacgacattttcaattcggatgaagacgaggaggcggcaggcgactatggcagaccg
agccatcgaagacctatgcacgatgagatgaaggactttatcgaagaagacgtcttcacg
gatgatgagctagagcgggaacgagaggatctggagattgcccgtccggcgaaaaggggc
gtcaccggtctcggggccaccgatgcagctggcttggacgagaatgccctcgaagatatg
cgcgcagcgttcggcgatggaaacgaatacctgttcgcccttgaaatggaagagcaagag
gaggagcaagaggaggaccaggagaagcatctggatttgaaggatgttttcgaaccgtcg
caattggcagagaggatgctgacagaagaggacaaccagattcgcttgttggacgagcct
gagcgtcatcagcttgcccgcaagccgtatcgcaacctcgttctgacggaagagcagttc
cgcgaagaggcagcctggatctcaaatcttatgcttctcaagaagcgcatcgaacccgaa
ttgagagaaccgttccagcggtccgtagccaaagtgctagagttcctcgtgacagacgac
tgggaggttcctttcattttccagcatcgcaaggactatatgattcacgcgaccaaggtt
cctgtggacggtgcgcctgctgatggggatacgtctcagtacaccgtcaaggccgagaag
cttctgaacatgacggatctctgggacatctttgaccatgatctcaaatttagagcattg
gttgagaagcgcaatgcaatccagaagacatacgacaatcttcagagcttattcagcgtg
aacgatagtgtcgtgcaggacatgctatctacggccgttaccatggaggaactccaagat
gtgcaggactacgttcactttcagtatgcctcgcagttgcgcgatattaacttgatgaat
ggggaggccaacggcgatactcatcggcgcaaggcgactggcaagtccttctttgagcgt
gtccgcaacggcaaggcttacagtcttgttcgcgcgtttggcatcacagcagatgctttc
gcgcagaatgcgctgaaggagggtcgtcgccagtatactgaggatccagctgagcgcccg
gaggagatggctgacagcttcattgacaacgacttctccaatgcttcccatgtgctcaaa
gccgccaaggccttgtttgcggaggagatcgtgatgagccctaagatgcgcaaggtgatc
cggcaagcatactacatgaacggcgcagttgattgcttccggactgaaaagggtctcagg
aggattgacgaacagcacccttactacgaattcaagtacctgagaaatcagcagctcagt
gacatcgcccgtcagcccgagctttatcttcggatgctcaaggctgaagaagagggtctg
gtggaagtcaaggttcgatttgagaattttgatcacttccggcagcgcctctacccggac
attgaatcggataactacagtgaaatcgccgatgtttggaatcgtacccgtcgcgaagtc
ctggacatggcgctgggcaagctggagcgtttgatcaatcgcagcgtcaaggaaaatatc
cgtcaagagtgcgagaatcacgtggcgaaggaatgtcgtgaagctttctctcagcgcttg
gatcaggctccttataagcccaagggcatggttctgggcactgttcctcgggtcctggcc
atgtctactggtaccggcattgtcggacgcgaccccatccactgggcatacgtcgaagaa
gacggtcgcgtgttggagaacggcaagtttgtggacttgtcaattggtgaccgagatcgc
agcatttccgacggtaaagatgtcgaggccttgatagagctgctggagcgccgccgacca
gacgtcattggtgtctcgggcatgtccccggaaacacgtaagctgtacaagcttctgacc
gaattggtcgagaagaaggatcttcgcggcgctacatacaccgacgaacgtgatgaagaa
atcagcgaccccttggaggtggtgattgtgaatgacgaagtggcgcggctctaccagcac
agtgagcgggcgaagaaggatcatcccagctttggtcccttgacgcattattgtgtcgca
ttggccaagtatctgcaaagccctctgaaggagtacgcctcgctaggtcgggatatcgtt
tccattcagttcaagcgaggccagcaattggttgctcaggagctgctcctgaaacagctg
gagaccgctttggttgatatggtcaacttggtgggtgttgatatcaacgaggccgtcacc
gatactgcgacagcaaaccttctcccctatgtctgcggtcttggcccccgaaaggcggcc
cacctactcaagattgtcaacatgaacggcggtgtggtcaacaatcgggttgagctactg
ggtgtaaatgcgcagtatccggccatgggcgtgaaggtctggaacaattgcgccagcttc
atgttcattgactttgaaaatgccgacccggatgctgatccgttggataacacccgagtg
cacccggaagactacgatattgcgcggaagatggcagctgatgcgttggaactggacgag
gaggacatcaaggcagaaaccgatgagaatggacctggcgctatcgtgcggaagctcttc
cgggatgaagcgcaggacagggtcaacgacctgatcctggaagagtatgcggaacagctg
gaaaagaacctcaaccagcggaagcgagcgacgctggagacgatccgcgccgagttgcaa
cagccgtatgaagaattgcgcaagcaattcgccttgctcagcactgacgatgttttcacc
atgctcacgggcgagacgtcggacaccctggccgagggcatggtggtacccatgtcgatc
aagcgcattacggatgaccacattgacggcaagctcgattgcggcgttgacgtgctggtg
ccagagtcggagcttaccgatcgctacgacatccccgtacgagctctctactcgctacac
cagacgctcccagccaaggtgctgttcttaaacaagaagagcttcttgtgcaatgtttcg
ctacgcgaggagcaagtcagtcgaccagcgcccagacctcgtgaccatatgcgtggggaa
tgggacgatcgacaggaggcaaaagaccgggagatgctgcaggagaagacgcagagcggc
gggcgcgtcatgcgtgtcatcaagcatcctctgttccgaccgttcaactccacacaggcg
gaagagttcctgggatcgcagagccggggtgatgtggtgatccggccatcgtccaaggga
ccggaccatctggccgtcacctggaaggtggccgacggcatcttccagcatatcgatgtc
ctggaactcgacaaggagaatgagttctctgtaggtcgtacgctgaaggttggtggtcgt
tacacctacagcgacttggacgacctgatcttcaaccatgtcaaggcgatggccaagaag
gtggacgagatgatgctgcatgagaagtaccaggaaggcagcaaggatgccacctactct
tggttgaacacctataccaaggcgaaccccagacgatctgcatatgccttctgtatcgat
cccaagcacccaggatactttttgctgtgtttcaaggccggtgagaatgcccagctacac
agctggccggtcaaggtcatccctcaaggctatgagttgcagcgtaatccgtacccggac
atgcgcgcgctgtgcaatgggttcaagctactgtttaccaatatgcaggccggcaagcga
cgatga
DBGET
integrated database retrieval system
