Aspergillus fischeri: NFIA_075650
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Entry
NFIA_075650 CDS
T01070
Name
(RefSeq) pre-mRNA splicing factor RNA helicase (Prp43), putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_075650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfi03041
]
NFIA_075650
03009 Ribosome biogenesis [BR:
nfi03009
]
NFIA_075650
Enzymes [BR:
nfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NFIA_075650
Spliceosome [BR:
nfi03041
]
Complex A
U2 snRNP components
U2 related factors
NFIA_075650
Complex B
NFIA_075650
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
NFIA_075650
Ribosome biogenesis [BR:
nfi03009
]
Eukaryotic type
90S particles
Helicases
NFIA_075650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
ResIII
AAA_7
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
4586252
NCBI-ProteinID:
XP_001259532
UniProt:
A1DE28
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MVDSRSDSEDRSRAKRQKMDKTETDPRNNPYLAHMYADASTNGNSSSSGTNPAFAKLKRH
QTTAALAKEIEDGEINPFTGQPFSSKYFSILQTRRDLPVHQQRDEFLQLYQQSQILVFVG
ETGSGKTTQIPQFVLYDDLPQTQRKMVACTQPRRVAAMSVAQRVAAELDVKLGEEVGYSI
RFEDMTSSKTCLKYMTDGMLLREAMHDHDLTRYSTIILDEAHERTMATDVLMGLLKEVVQ
RRPDLKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQ
IHATEPDGDILLFLTGEEEIEDAARKISLEADEMVREADAGPLKVYPLYGSLPPHMQQRI
FEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVS
PISKASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIDQTYPEILRSNLSSTVLELKKLGI
DDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSP
EFYCSNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEA
QENPKQWCHDHYLSLRSLQSADNVRMQLLRIMEREELEMISTPFEDKKYYENIRRALCAG
FFMQVAKKEPQGKSVYTTVKDNQSVLLHPSTVLSYDAEWVLYNEFVLTTKNYIRTVTAVK
PEWLLDIAPTYYDISTFPKGEIRSSLLRAAERLSRKEKMRGDSAKRR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggtcgattcgcgctcagactctgaagatcgctcgcgtgctaagcgtcagaagatggac
aagacagagacggatcccaggaacaatccttacctggctcatatgtatgcggatgcgtct
accaacggcaactcgagctcatcggggacgaatcctgctttcgcgaagttgaagaggcat
cagacgacagcagcactggcaaaggagatagaggatggggagatcaatccttttaccggc
caacctttctccagcaagtacttctctatcttgcagactcgtcgtgatcttccagtgcac
cagcagagagacgagtttctgcagctttaccagcagtcccagattctagtcttcgtcggt
gagactggttccggaaagactacacagatcccccagttcgtcttgtacgatgatttaccg
caaacgcagcgcaaaatggtcgcttgtactcaacctcgtcgagtcgctgccatgtccgtt
gctcagcgtgtggctgctgaattggatgttaagcttggagaggaagttggttacagtatc
cgtttcgaggacatgacaagttccaagacctgcttgaaatatatgacggatggtatgctt
ctgagagaagctatgcatgatcacgaccttacacgctacagcacaattattcttgacgaa
gctcacgaaagaaccatggctaccgatgtgcttatgggtcttctcaaagaagttgtgcag
cgtcggcccgatttgaagatcattatcatgtccgccaccttggatgcgcaaaagttccag
cggtatttcaacgacgctcctctacttgccgttcccggtcgtactcatcccgtcgagatc
ttctatactcccgaaccggaacaagattacgtagaagcagccattcgcactgtccttcaa
atccacgccacagagccagatggtgatatccttctgttcctgaccggtgaggaagaaatc
gaagatgctgcgcgcaagatatcgcttgaggcggacgagatggtgagagaagccgacgct
ggtcccttgaaagtctatccgctttacggcagtctgcctccgcacatgcagcagcgtatc
ttcgagcccgctcctccccctcgcagacctggcggtcgtcctggccgtaaggtgattgtt
tcgacgaacattgcagaaacatctcttaccatcgacggaatcgtgtacgtggtggatccg
ggattctcgaaacagaagatctacaacccccgaattcgggtcgagtcacttctcgtgtct
cccatctccaaggcttccgctcaacaaagagctggtcgtgcgggtcgtacgcgccccgga
aaatgcttccgtctatacacggagggtgcattcaagaaggagttgattgatcagacctat
cccgaaattctccgatctaacctttcttcgaccgtgctagaattgaagaagttgggaatc
gatgatctggtacattttgacctgatggaccctcccgcccccgagactctcatgagagct
ctggaagagttgaattatctggcttgccttgatgacgacggcaacctgacaccgctgggc
cgccttgcctccgagtttcctcttgaccccgcgcttgccgtcatgctgatcagctctccc
gagttctactgctcaaatgagattctgtcgatcacagctctgctttcggttcctcaaatt
ttcgtgaggcccgcctcgcagagaaagcgcgccgacgagatgaagaatcttttcgctcat
cccgatggtgaccacctcactcttctgaacgcctatcatgccttcaagagtccagaagcc
caggagaatccaaagcagtggtgtcacgatcattatctctccctcagatctctccaatcg
gcagacaacgttcgtatgcagctcctgaggatcatggagcgcgaggagctggaaatgatc
tcgactcctttcgaagacaagaaatactacgagaacatccggcgtgcgctgtgcgcggga
ttcttcatgcaggtcgcaaagaaggaaccacagggaaagagtgtttatacgaccgtcaag
gacaaccagagtgttcttctgcacccgtcaactgtcctcagctatgatgccgagtgggtt
ctctataacgaattcgtcctcaccactaagaattacattcggactgtgaccgccgtcaaa
cccgaatggctccttgatatcgctcccacatactacgatatctcaaccttccccaagggc
gagatccgatcctccttgctgcgcgccgcagagagactgtcacgcaaagagaagatgcgc
ggagactctgcaaagagacgatag
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