Aspergillus fischeri: NFIA_075690
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Entry
NFIA_075690 CDS
T01070
Name
(RefSeq) transcription factor TFIIH subunit Tfb4, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
nfi
Aspergillus fischeri
Pathway
nfi03022
Basal transcription factors
nfi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFIA_075690
09124 Replication and repair
03420 Nucleotide excision repair
NFIA_075690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfi03021
]
NFIA_075690
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_075690
Transcription machinery [BR:
nfi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NFIA_075690
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NFIA_075690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
4586332
NCBI-ProteinID:
XP_001259536
UniProt:
A1DE32
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MNAVDATEHYETSASDPAPSLLTIVLDTNPHAWALLKDSLPLSTAIANILVFVNAHLACN
YANEVAVVASHSQKATWLYPRETKEDNGKSNSKTGRDEDGDVAMNGSGAGAGAGSAAAQV
NKYRPFRIVEEQVTRNLRELMDSTSGADVAATTSTMMAGALTLALSHINRRSIAWADAHG
GTAAGPPGAVEAGSSGAGRAGTDTGAEGLQSRILIISVSGSTDSAHQYIPIMNCIFACQR
LHIPIDVCKLSGDAVFLQQASDATKGVYMSLSEPRGLLQYLMMAFLPDQRSRRHLVIPTR
VDVDFRAACFCHRRVVDIGFVCSICLSIFCEPPENGDCLTCGTHLEMGDYGAKPAVVARK
KKKKKVRTNGASATATPTPTPTPGP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtagatgcgacggagcactacgaaacaagtgccagcgatcccgccccctcc
ctgctgaccatcgtcctcgacacaaacccccatgcttgggccctcctcaaagactccctc
ccgctctccaccgcgatagccaacatcctcgtcttcgtcaacgcccatctggcctgcaac
tacgccaacgaagtcgcggtcgtcgcatcgcacagccaaaaggcgacatggctgtacccg
cgcgagaccaaagaggacaatggaaagagcaacagcaagacagggagggatgaagacggc
gatgttgccatgaacgggtccggcgcgggagcaggagcaggatctgctgcggcccaggtg
aacaagtaccgccccttccgcatcgtcgaggaacaagtcacccgcaacctgcgagagctc
atggactcgaccagcggcgcggacgtcgcggccaccacctcgacgatgatggcgggggcg
ctgacgctggctctcagccatatcaaccggcgatcgattgcgtgggcggacgctcatgga
ggaaccgctgctgggccgccgggggcggttgaagctggcagctccggggctggtagggct
gggacggatactggggctgagggtctgcagtcgcgcattctgatcatctccgtgagcggt
tcgacggattcggcacatcagtacatcccgatcatgaactgtatctttgcctgtcagcgg
ctccatatccccatcgatgtgtgcaagctgagcggggatgcggtgttcctgcagcaggcg
tccgatgccaccaagggagtttacatgtcgctctccgagcctcgcggcctactacagtac
ttgatgatggcattcctacctgaccagcgctctcggagacacttggtcataccaacgcgc
gtcgacgtcgacttccgtgccgcttgcttctgccatcgccgtgtcgtcgatatcggcttt
gtctgctcaatctgcctgagtatcttctgcgaacctcctgaaaacggcgactgccttact
tgtggtacccatctcgagatgggtgactacggtgccaagccggcggttgtcgctcggaag
aagaagaagaagaaggttcgcaccaacggtgcatcagcgaccgcaactcccacacctaca
cctacaccgggcccttga
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