Aspergillus fischeri: NFIA_076460
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Entry
NFIA_076460 CDS
T01070
Name
(RefSeq) topisomerase II associated protein (Pat1), putative
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_076460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_076460
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NFIA_076460
mRNA degradation factors
5'-3' decay
Decapping complex
NFIA_076460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Mug135_C
Motif
Other DBs
NCBI-GeneID:
4585925
NCBI-ProteinID:
XP_001259613
UniProt:
A1DEA9
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MSFFGFDTTLPRDRPPAGEKRGFFEAPDPFAEVARAGAGRLTDDDDAIDFEDTYDGLGDQ
LDDDQDAFNEDTFGDVGTGSVGKDFDFFGQTAQVADAIGEEQVRFNLQHPGAPSGSSAKE
IAAQPPAPSVSADKPKRTGYEKYQDPGYIPDLQAKSSVWGLQKKPEPAHEPVHEHVHQHV
HQHVHEPVSQAKKMLSLEEVEAQLRSHGIAPVQPPVSMPMPMPDLSHLQRTQQLPNVPEA
FSQLPPEFLQAQFPKDAPPAHLLHHPSIVPEPYSLPPSAPNVPLHLLQNANILPQHMAPP
QRQAIPPRVQQPPPQHPPPQAIKGANTGLPLITNPQQLMQLTEEQRMAYLMEDAKRAKRN
HKIFLLSKGNGLMTPQDKNFITRIQLQQLVAAAGNVADADLEAVLAEDFYYQVYSQIRGA
PRQHPHQPLGHFAQTYLLQTGNRLGGHGRRNLQSADNHMQRMQQQVQRAVEAAKAKPKNK
QLIIEGSLGKISFSNAKAPKPILNIKRPETSDGAKAAKKPPTDLSLSDRKSILMNIENVY
STLMEMEDMERTMPPLPDENDAEAIQKHLEWRQKIRSLNQKLWQELKVMEPIVPNTNTPH
PFIAFLSYPKGKKAIPRIFRHIDQEQRVTILTMIVVHLDTLDVVRSAQPVPGESQPSLAV
REAIDLFSQAVMPSLLGYVNEAPFNIIIGLLGLVIAQTHVQLVAKTRIGLGILTMLLSRA
EIVKEAGQAAERDWQQWVEKFNVLFDTLEPTFGDIFPTSINAGDDMYVWQFLAAVGIGAS
PEQQQRLVIAVKDRVMETVTYSKTLPADMASQRLGNVNLFMRAIGLDVELLG
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcttcggcttcgatactaccctaccgagggaccgacctcctgcaggggaaaaa
agggggttcttcgaagctcctgatccctttgccgaagtcgcccgtgctggggcaggacgc
ttaaccgacgatgatgatgccatcgattttgaggacacttacgatggtctaggggatcag
ctggacgacgatcaagatgcctttaacgaggacacgttcggcgacgttggcacaggctcg
gtcggcaaggacttcgactttttcgggcagacagcacaggttgcggatgctatcggtgag
gagcaagttcgtttcaatctacaacacccgggtgctcctagtgggagctcggcgaaagag
attgctgctcagcctccagcacctagcgtctcagcagacaaacccaaacgtactggatat
gagaaataccaggacccgggatatatccctgacttgcaagccaagtccagcgtctggggc
ttgcaaaagaagccagagcctgctcatgagcctgttcacgagcatgttcaccagcatgtt
caccaacatgttcacgagcctgtatcgcaagccaagaaaatgttaagcttggaggaggtc
gaagctcagttacgtagtcacggtattgctccggtccagcccccggtctctatgccgatg
ccgatgcccgatctttcgcatcttcaacggacccaacagctgccaaacgttcccgaagcc
ttttcacaactgccgcccgagtttctccaggcccagtttcccaaagatgcaccgccagca
catcttctgcaccatccctctatagtgccagagccatattctctaccaccaagtgcgcca
aatgtgccactgcatctcctgcaaaatgccaatatcctgccccaacatatggcacctccg
cagcgtcaggcgatccccccacgagtgcagcagcctccgccacagcatccgccaccgcag
gctataaagggagcaaataccggcctgcctttgatcaccaatcctcagcagctgatgcag
ttgacggaggaacaacgcatggcatatttgatggaggatgcgaagcgggcaaagcgcaat
cacaagatattcctcctgtcaaaaggtaatgggttgatgactccccaagacaagaacttc
atcacgcggatccaattgcaacagcttgtggcggccgcaggtaatgttgcggatgcggac
ttggaggctgtcttagcggaggacttttactaccaggtttacagccagatccgtggtgcg
cctcggcagcatccgcatcagcctcttggccactttgcgcagacctacctgcttcagact
ggtaaccgccttggtggccatgggcgaaggaatctccagagtgccgacaaccatatgcaa
aggatgcagcagcaggttcagcgtgcagttgaagcggcgaaagcgaaaccgaaaaacaag
cagttgatcatcgagggcagtctgggcaagatctctttcagcaatgccaaagcgccgaag
ccaatactcaacatcaagcgccccgagacgtcagacggagccaaggctgccaagaagcca
cccacggacctgagcctcagtgatcggaagtctatcctgatgaacattgaaaatgtgtac
agtaccttgatggagatggaagacatggagcgcaccatgccccctctgcctgacgagaat
gatgctgaagccatccagaagcacttggaatggcgccagaagatccgttccttgaaccag
aaattgtggcaagaactcaaggtcatggagcctattgttcctaacactaacactccacat
ccatttattgctttcctgtcttatcccaagggcaagaaggctattccacgcattttccgt
cacattgaccaagaacagcgagtcacaatcctcacaatgatcgttgtccacctggacacc
ttggacgtggttcgaagcgcacagcctgttccaggcgagagccagccttcgctcgcggtt
agagaagccattgatctgttctctcaggctgttatgcccagcctcttgggatatgtgaac
gaggcaccgttcaacatcattattggtcttctgggtcttgtgattgcgcagactcacgtg
cagctagtggccaagactcgcatcggcctgggaatattgactatgttgctcagccgtgca
gagattgtaaaggaagctgggcaggccgcggaacgtgactggcaacaatgggttgagaaa
ttcaacgtcctgttcgacacactcgagccaacctttggcgatatcttccccacctcgatt
aacgctggcgacgatatgtatgtctggcagtttttggcagcggttggcatcggagcgagc
cctgagcagcagcagcgcttggtcatcgcagtgaaggatcgtgtgatggaaacagtgaca
tacagcaagacgctgcccgccgatatggccagccaacgattaggaaacgtcaacctattt
atgcgtgccattggacttgatgtcgaacttctcggctaa
DBGET
integrated database retrieval system
