Aspergillus fischeri: NFIA_078970
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Entry
NFIA_078970 CDS
T01070
Name
(RefSeq) RNA binding domain protein
KO
K12881
THO complex subunit 4
Organism
nfi
Aspergillus fischeri
Pathway
nfi03013
Nucleocytoplasmic transport
nfi03015
mRNA surveillance pathway
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_078970
09122 Translation
03013 Nucleocytoplasmic transport
NFIA_078970
03015 mRNA surveillance pathway
NFIA_078970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_078970
03041 Spliceosome [BR:
nfi03041
]
NFIA_078970
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NFIA_078970
TREX complex
NFIA_078970
Spliceosome [BR:
nfi03041
]
Complex C
Other components
EJC/TREX
NFIA_078970
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
NFIA_078970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
4586409
NCBI-ProteinID:
XP_001259853
UniProt:
A1DEZ9
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MDRSLDEIIAERPQKQNRGRRPPQGQGRRRDGVKKSYREERVDLDLDWVHDRYDDDRDSF
FQHALLVVPDVHAVTVTPHRPIGMSGLDLLLKHFVGVAANSCSSAPAGAKIRVENLHYDI
TESDLEDLFTRIGPVSNLSLVYDRAGRSEGVAYVTYNRANDARTAIAEFDGANAKGQPIR
LTLVASGPGKRDRNPFDNVERPKGSLFDRIERPRDARSLSPGSENGDADGGARRRRGRRP
GGGAGHRRSDVSKPAPEHIDRYVPGQRSPVRRSTNGRRQGERRDDRNRGEGRRNPNARPK
KTQEELDQEMDDYWGGANAGAGAADKEVVQDEPQQIAPATSAAAGDDDVDMIE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtagtctcgatgagatcattgccgagcgccctcagaaacagaacagaggtcgc
cgtcctcctcaaggtcaaggtcgtcgccgtgatggcgtgaaaaagtcctacagagaagaa
cgagtcgacttggatcttgattgggtccacgacagatatgacgacgacagagacagtttc
tttcagcacgccctgctcgtggttcccgacgtccacgcggtgaccgttactccccatcgc
ccgatcggtatgtctggcttggatttactgctgaagcactttgtgggtgtggcggctaac
tcctgcagcagcgcacccgccggagcaaagattcgcgttgagaaccttcactacgacatt
acggagagcgatctggaggatctgtttactcggatcggacctgtctcaaatctatctctc
gtctatgatcgggctggacgctccgaaggtgttgcttatgttacgtacaaccgtgcgaac
gatgcgagaacggcgattgcagaattcgatggcgcaaatgccaaaggacagcctatccgt
ttgacactagtcgcctctggccctggaaaacgggaccgcaacccatttgacaatgtcgaa
cggcccaagggaagtctttttgatcgcatcgagcggcctcgcgacgcccgaagcttaagc
cccggaagtgagaatggtgatgccgatggcggagcacgtcgtcgccggggccgtcgccct
ggtggaggcgcaggccatcgccgtagcgacgtctcgaagcctgcccccgagcacattgac
cggtacgtgccaggtcagcgatcgccagtccgacgaagcaccaatggccgacggcagggg
gagcggcgagatgatagaaatcgaggcgagggtcgccggaaccctaacgccagacctaag
aagacgcaggaagagcttgatcaagagatggatgattactggggaggcgcaaatgcgggt
gctggcgctgccgacaaagaggtcgtacaggatgagcctcagcagattgccccagctacg
tccgctgcggctggtgatgatgacgttgatatgattgagtag
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integrated database retrieval system