KEGG   Aspergillus fischeri: NFIA_078970
Entry
NFIA_078970       CDS       T01070                                 
Name
(RefSeq) RNA binding domain protein
  KO
K12881  THO complex subunit 4
Organism
nfi  Aspergillus fischeri
Pathway
nfi03013  Nucleocytoplasmic transport
nfi03015  mRNA surveillance pathway
nfi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NFIA_078970
  09122 Translation
   03013 Nucleocytoplasmic transport
    NFIA_078970
   03015 mRNA surveillance pathway
    NFIA_078970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfi03019]
    NFIA_078970
   03041 Spliceosome [BR:nfi03041]
    NFIA_078970
Messenger RNA biogenesis [BR:nfi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     NFIA_078970
    TREX complex
     NFIA_078970
Spliceosome [BR:nfi03041]
 Complex C
  Other components
   EJC/TREX
    NFIA_078970
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NFIA_078970
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 4586409
NCBI-ProteinID: XP_001259853
UniProt: A1DEZ9
LinkDB
Position
Unknown
AA seq 353 aa
MDRSLDEIIAERPQKQNRGRRPPQGQGRRRDGVKKSYREERVDLDLDWVHDRYDDDRDSF
FQHALLVVPDVHAVTVTPHRPIGMSGLDLLLKHFVGVAANSCSSAPAGAKIRVENLHYDI
TESDLEDLFTRIGPVSNLSLVYDRAGRSEGVAYVTYNRANDARTAIAEFDGANAKGQPIR
LTLVASGPGKRDRNPFDNVERPKGSLFDRIERPRDARSLSPGSENGDADGGARRRRGRRP
GGGAGHRRSDVSKPAPEHIDRYVPGQRSPVRRSTNGRRQGERRDDRNRGEGRRNPNARPK
KTQEELDQEMDDYWGGANAGAGAADKEVVQDEPQQIAPATSAAAGDDDVDMIE
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggaccgtagtctcgatgagatcattgccgagcgccctcagaaacagaacagaggtcgc
cgtcctcctcaaggtcaaggtcgtcgccgtgatggcgtgaaaaagtcctacagagaagaa
cgagtcgacttggatcttgattgggtccacgacagatatgacgacgacagagacagtttc
tttcagcacgccctgctcgtggttcccgacgtccacgcggtgaccgttactccccatcgc
ccgatcggtatgtctggcttggatttactgctgaagcactttgtgggtgtggcggctaac
tcctgcagcagcgcacccgccggagcaaagattcgcgttgagaaccttcactacgacatt
acggagagcgatctggaggatctgtttactcggatcggacctgtctcaaatctatctctc
gtctatgatcgggctggacgctccgaaggtgttgcttatgttacgtacaaccgtgcgaac
gatgcgagaacggcgattgcagaattcgatggcgcaaatgccaaaggacagcctatccgt
ttgacactagtcgcctctggccctggaaaacgggaccgcaacccatttgacaatgtcgaa
cggcccaagggaagtctttttgatcgcatcgagcggcctcgcgacgcccgaagcttaagc
cccggaagtgagaatggtgatgccgatggcggagcacgtcgtcgccggggccgtcgccct
ggtggaggcgcaggccatcgccgtagcgacgtctcgaagcctgcccccgagcacattgac
cggtacgtgccaggtcagcgatcgccagtccgacgaagcaccaatggccgacggcagggg
gagcggcgagatgatagaaatcgaggcgagggtcgccggaaccctaacgccagacctaag
aagacgcaggaagagcttgatcaagagatggatgattactggggaggcgcaaatgcgggt
gctggcgctgccgacaaagaggtcgtacaggatgagcctcagcagattgccccagctacg
tccgctgcggctggtgatgatgacgttgatatgattgagtag

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