Aspergillus fischeri: NFIA_082200
Help
Entry
NFIA_082200 CDS
T01070
Name
(RefSeq) sister chromatid cohesion protein Mis4, putative
KO
K06672
cohesin loading factor subunit SCC2
Organism
nfi
Aspergillus fischeri
Pathway
nfi04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
NFIA_082200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfi03036
]
NFIA_082200
Chromosome and associated proteins [BR:
nfi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
NFIA_082200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
HEAT
INTS1_R4
Adaptin_N
CLAMP
FAM176
DUF4238
Motif
Other DBs
NCBI-GeneID:
4586727
NCBI-ProteinID:
XP_001260170
UniProt:
A1DFW6
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MDQNWSPAVQVVINGRPQAQGHSSGGLSQRRTRPLSVDEALQYSPMSSAPVFGLDCILRP
DVGRPPTTTSINHILQSGRTVLNELNAEIQSGHDESSRLETSREYLQQLLDGDQLTEFKF
KLPPGSAQAKSSLPSPPSEQASGRNELGPFAKMMLDATDIAFRYPTSTEVKIEKPMRKSP
AWNEQAHRANNATPASYNQSAYPASQLSVVIPVKSIHTLNEHGASKKRKLNNDVEDLTMI
RLKDQKEEADAALVKLQDLFHEVFQAEDQVETEPTAGGSTERQDPVFSVAHSLDTNGPIL
SSDAHSRLQKAMKKVVGFNRLQDIPSEYLSRLRKLSERPIIAAQSPDLRLDDPSNDSETQ
EWLQKVDDMLNALLAVGTLLQTMSGSRTERDLCPEDLIEAIPNVFNQIFDHCVIPAVEAR
PGGKEARYFAFFTSQKRVIGGVIQQSKKILGLFADFLSRIDVSEGTITATEFFAAKLIFV
ENAHSEKDSAVGFQKYESLRRGAMDVLAKIFSRYPAQRPFILDEILVSLEKLPSTRQSAR
QFKLADGKSIQLLTALVMQLVQTTALDTPSSKTRKSKRNLSAGDDDDESQENEEDSDEDG
DEDQTDASLERLATKVNRLYDNAVRSAQYIVKFIVQRAMTSTKTGDQPFRNILDIFTEDL
IGVLGSTDWPAAELLLRIMASHMVGIADLDKSPATAKSMALELLGWMGSAISDLVVTAQH
LLPSMEESDSELSVYLRQLFEDYSNHALHTQDLVVPEGPYRIALEYFLQAQSSDNWQLSS
ARGYYLAQWAKTVCSVYYNSEDRDDVPDGEATEGLVVLLTKLFSEPLWLETHRISTAHGR
FAYILTVLNSSFCKAFDTILKVLLNSIASDQAKVRSRSLKSVIYMLEKDPSLLDRDASVM
RVILRCATDASPMVRDSALSLIAKCIALKPKLEEDGCRSILTCAADPTAGVRKRCIGLLK
DIYLKTSRIELKLAIADSFLQRTTDTEESVATLARQTFEEIWLTPFHELIDSSQDGSKLK
VGLGERVTLIVSLVQRSETALETLGFCLEKILSDNSKTASLNFKVCKAMVATMFEKLVED
ESSEKEFQQALLQTITVFAKANAKLFSPDQLETLHPYIGNLATAEDLFIFRSVVVIYRCV
LPYLSSAHNSLLKEVQNDLFKSVAKLARSELNEVMACLWTINGVLRNTDRLVKLTISVLK
PIQHYRNVDLADNANSAIVARAKSYIRIAGCVGRHCDLEKYEPHFKNAFPSWKGGSVAGL
MVDSIVPFTLPKQPLELRVMALESVGSICQSWPAQFSRDEPRKILSMVFKEDNASLQNIV
LKSFAEFFAMHEGKAEKSVVPSAEKADQENSTRLGGSLKASDNDGAAALIAQHFLQSMLR
VAQSRQDAYALTAIELIASINRQGLVHPKECAGVLVSLETSTVPAIAKVAFDTHKMLHQQ
YESMFEREYMRAVQEAFYYQRDVVGDPSGALARPYVAKLAPLFDIIKTSNSRYQKKFLSN
LCSKVDFELKKLDSTGDPPEHLLLARFVAQNLAFFDYGQLAELVSAVGCMERIVSATGTV
VAHSVETEIFPPRMEAPLGELSSEPVPQGPGNAEPLPQVNPSVLRQLATAAASLSMLWET
RTYLRRLYGIHAHVREKEGKAAAKELNKSATKVQGVTGDKFWDAISRNMEALNGEEQMIS
KCREFATLLAIDDEFKVGEDEDEDAEVNSFDAVADLDATGAGPGSLGGQRPGKRKNSVSS
QNPAKRPRGRKSGSGKKRASTEPEDDLDWG
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaactggagcccggctgtccaggtcgtcatcaatggccgtcctcaggcgcag
ggccatagctctggaggactttcgcaacgccggactaggccattgtctgttgatgaagct
ttgcagtactcgcctatgtctagcgcgccagtgtttggcttagactgtatactgcgccct
gacgttggccgacctcccactaccacctcaatcaatcatatccttcagtcgggtcgaacg
gttttgaatgaactaaatgctgagatacaatccgggcacgatgagtcgagtcggttagag
acatctcgcgaatatctacagcaactgcttgatggtgaccagttgacagaattcaagttc
aaacttccccctggatccgctcaggccaagagttccctgcctagcccaccctcagagcaa
gcgtctggtcggaatgagcttggcccgtttgcaaaaatgatgctggatgctacggacata
gcatttcgatatcctacctcgacggaagtcaagatcgaaaagccaatgaggaaatccccg
gcgtggaacgagcaagcacatcgagcgaataatgctactccggcgtcttacaatcagtcg
gcttacccagcaagccagctgtctgtcgttattccagtcaagtctatacatactctgaac
gaacatggcgcgtcgaagaagagaaagctcaataacgatgtggaggaccttactatgatt
cggctgaaggatcaaaaagaggaggcagatgctgctcttgtaaagctacaggatctgttt
cacgaggttttccaggcggaggatcaagttgaaacagaaccaactgctggtggatcgacc
gaacgacaagatcccgttttctcggttgctcactcccttgacacaaatgggcctatcctc
tcatctgacgctcatagccgtcttcagaaggctatgaaaaaggttgttggtttcaaccgg
cttcaggacatcccatcggagtatttaagtagattgcggaaactttctgagaggccaatc
attgccgcacaatcacccgatctcagactggacgacccgtcaaatgattctgaaacccaa
gagtggctccaaaaagtcgatgatatgctcaatgctctgctcgcagtgggtacactgttg
cagacaatgtctggctctcggacggaaagggatctctgtccggaggatctgatcgaggcc
attccgaatgtattcaatcagattttcgatcactgcgtcattccagcagttgaagcccgc
cctggaggcaaagaagccaggtattttgcgttcttcacttcacagaagcgtgttataggg
ggtgttatccagcaaagtaaaaagattcttggcctatttgccgacttcctgtcgcgcatt
gatgtctctgaagggacaatcaccgcgactgagtttttcgctgcaaaactaattttcgtg
gagaacgcgcattccgaaaaggactctgccgtcggcttccagaagtatgaatcacttcgc
cgtggagcaatggatgtcctggcaaagattttctccaggtatcctgctcagcgtccattc
attctcgacgagattcttgtgtctctggaaaagcttccgtccacgcggcaaagtgccagg
caattcaagctcgccgatggtaagagtatccagcttctgaccgctttggtcatgcagctt
gtccagaccactgcccttgacactccatcgtccaaaacacgaaaatcgaaacgtaatctc
tcggcaggcgacgatgacgatgagtcacaagaaaatgaggaagactcggacgaagatggc
gacgaggatcagaccgatgcatctctggagcgtctcgcaacgaaagtcaaccgtctctat
gataatgcggtccgcagtgcgcaatacatcgtcaagttcatcgttcaacgtgcaatgaca
tctaccaagactggcgaccaaccctttcgaaacattcttgatatattcaccgaggatctg
attggtgtcctaggctcaacagattggccggcggctgaactacttcttcgcatcatggcg
tctcatatggttggtattgcagatcttgataagagccctgccactgcgaaaagcatggct
ctggagcttctgggctggatgggatccgccatatccgatctagtcgtgaccgctcagcac
ttgcttccctcgatggaagagtccgatagtgaactcagtgtctatttgagacagttgttt
gaggactactccaaccatgccttacatactcaagatctagttgtgccagaaggtccgtat
cgaatagctctcgagtactttctgcaggctcagtcatcggacaactggcagctctccagt
gctcggggttattacttggcgcaatgggcaaagaccgtctgttccgtctattataattcc
gaagatagggacgacgtacctgatggtgaagctactgaaggccttgtggtactcttgacg
aagttgttctccgagccgctgtggttggaaactcacaggatatcaaccgctcatgggcgg
ttcgcatacattttgaccgttttaaactcgagcttttgcaaggcttttgatacgatcctc
aaagtcctcctcaattcgattgctagtgatcaggcaaaggttcgcagtcggagtctaaaa
agcgtgatctacatgctcgaaaaagacccaagtcttctagacagagacgcatcagtcatg
cgcgttatccttcgatgcgctacggatgcctcgccgatggttcgcgactcggcgctttcg
ctgatcgccaaatgcattgctctcaaaccgaagttggaagaggatgggtgcaggagcatc
ctgacctgcgcagccgatcctacagctggtgttaggaagcgctgcattgggctgctaaaa
gatatttacctcaagacgtctcgcattgaattgaagctggctatagcagatagctttctc
caacggacaacggatacagaagaaagcgtagccactttggcgcgacagactttcgaggag
atttggcttaccccgtttcatgagcttatcgattcatcacaagatggctcgaagctcaag
gttggtctaggagagcgggtgacgttgatcgtaagcttggtgcagcgcagcgagaccgct
ctcgaaacattagggttttgtttggaaaagattctatcggacaattccaagacggcctca
ttgaacttcaaagtttgcaaagcgatggttgcaacgatgttcgaaaagttagttgaggat
gagagctcggagaaggagtttcagcaggctctccttcaaacgatcacagtatttgccaag
gcaaatgcgaagctattcagccctgatcaactggagacccttcatccttacatcggcaat
ctcgccactgcggaggatttgttcattttcagatccgtggtggtaatctatcgctgtgtc
ctgccgtacctttcgtccgctcacaacagtcttctgaaagaagtgcaaaacgatcttttc
aaaagcgtagcgaaacttgctcgttcagagctcaacgaggtcatggcctgtttgtggaca
atcaatggcgttttgcgcaacactgacagactcgtgaaactgaccatatcggttctgaaa
ccgattcaacattatcgaaacgtcgatcttgcagacaatgctaattcggctattgtggcc
agagctaagagctatattcgaattgccggctgcgtcgggcggcattgcgatctagagaag
tacgaacctcatttcaagaacgcttttccgtcttggaaaggcggatcggtggctggcttg
atggtcgactccattgtcccttttactctcccgaaacagcctctggaactcagggttatg
gcgttagagagcgtgggctcgatatgccagtcctggccagctcagttcagccgggatgaa
ccgagaaagattctttccatggtcttcaaagaagacaatgcaagccttcagaatatcgtc
ctgaaatcctttgcggagtttttcgccatgcacgagggcaaagcagagaagtcagtcgtg
ccatctgctgaaaaagcggaccaggagaactctaccagactgggtggctcattaaaagca
agtgacaacgacggggctgccgctctgatagctcaacacttcctacagagcatgcttcga
gtcgcgcaatctcgacaggacgcgtacgctctcactgccattgaattaattgctagcatt
aaccgtcaaggactggtccatcccaaagaatgcgcaggcgtgttggtttcactggagaca
tccaccgtgccagccattgccaaggttgcgtttgacacacacaagatgctgcatcaacag
tatgaatcaatgtttgaaagagaatatatgagggccgttcaggaggctttctattaccag
cgcgatgtggtcggtgatcctagcggcgctttggcccgaccttacgttgcaaaattggca
ccgctttttgatattatcaagaccagtaacagtcgatatcagaaaaaattcctgtccaac
ctgtgttcgaaggtagacttcgaattgaagaagctcgacagcactggggacccgccagag
catcttctacttgcgcgatttgtggctcaaaatctggcattcttcgattatggccagctt
gctgagctggtctcagcagttgggtgcatggagcgcattgtttccgcgacaggaacagtc
gtagcccattcagttgaaacagaaatttttccgcctaggatggaggcaccactgggagaa
ctgtcatctgaacctgtgccacaagggccaggcaatgcagagcctctaccccaggtcaat
ccgtccgtgttacgacaactagctacagcagccgcatccctctcaatgctttgggagact
cgaacataccttcgccgtctgtacgggatacatgcccatgtacgagagaaggaaggcaaa
gctgcggccaaggagctgaacaagtccgccaccaaagtgcaaggtgtgaccggcgacaaa
ttttgggacgccatatctcggaacatggaagcactgaatggcgaagagcaaatgatcagc
aaatgtcgagaatttgccactttgcttgcgattgacgatgaattcaaggtcggtgaggat
gaggatgaggatgctgaagtcaacagcttcgacgctgtcgctgaccttgacgccacgggg
gctggtccagggtcccttggtgggcagcgacctggcaaacggaagaattctgtttcttct
caaaatcccgcgaagcgaccccggggaagaaagagcggctctggcaagaaaagagccagc
acggaaccagaggatgacctggattggggctaa
DBGET
integrated database retrieval system
