Aspergillus fischeri: NFIA_083100
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Entry
NFIA_083100 CDS
T01070
Name
(RefSeq) replication factor A 1, rfa1
KO
K07466
replication factor A1
Organism
nfi
Aspergillus fischeri
Pathway
nfi03030
DNA replication
nfi03420
Nucleotide excision repair
nfi03430
Mismatch repair
nfi03440
Homologous recombination
nfi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFIA_083100
03420 Nucleotide excision repair
NFIA_083100
03430 Mismatch repair
NFIA_083100
03440 Homologous recombination
NFIA_083100
03460 Fanconi anemia pathway
NFIA_083100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfi03000
]
NFIA_083100
03032 DNA replication proteins [BR:
nfi03032
]
NFIA_083100
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_083100
Transcription factors [BR:
nfi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NFIA_083100
DNA replication proteins [BR:
nfi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NFIA_083100
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NFIA_083100
MMR (mismatch excision repair)
NFIA_083100
DSBR (double strand breaks repair)
HR (homologous recombination)
NFIA_083100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
Motif
Other DBs
NCBI-GeneID:
4586813
NCBI-ProteinID:
XP_001260256
UniProt:
A1DG52
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MALDAASQISVGALSAIFDETKPQIHEPIVQCVQIKPLPPQPNHQERYRAVFSDISNYVQ
TMLATQANPLVTSGMLKKGCFVRLKSFQANSVKGKKILIILDLEVLQELGEAEKIGEPKP
LENKLEEDERPQPTTISGGGFYGSKVQNQRGEPRVQPARSSLTSTHATIYPIEAISPYSH
KWTIKARCTSKSAIKTWHNRNSEGRLFSVNLLDDSGEIRATGFNEQCDLLYDVFHEGSVY
YISSPCRVQIAKKQFTNLNNDYELTFEKDTVVEKAEDQSDVPQVRFNFTTVGDLQSVEKD
TTIDIIGVLKDVGETTQIVSKTTSKPYDKRELTLVDSSGFSVRLTIWGSTALNFNATPES
VIAFKGVKVSDFGGRSLSLLSSGSMTVDPDIEEAHRLKGWYDAQGRHETFTSHATMSNAS
SSAMRLDHLKTIAQIREEQLGMSEDAVYFSLKGTVIYIKQDNMCYPACLSEGCNKKVTEL
DPGQWRCESCDKTHPRPEYRYIMLINVSDHTGQLWLSCFDEVGKQLMGTSADQLMDLRQN
GEKAAGDIFQEANCRTWNFRCRAKLDHFGDQQRIRYQVSTAKPVNYSEEASRLMALINSY
GLS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgatgcagcatctcagatctcagtcggggcgctcagcgccatcttcgatgaa
accaaaccgcaaatccatgaacctatcgtccagtgtgtccaaattaaacctttgcctccc
caaccgaaccatcaggagcggtacagagccgtgttcagtgatatctcgaattatgttcag
accatgcttgcaacacaggcgaatccactcgtaacgagtggcatgctaaagaaggggtgt
tttgtccgtttgaagtcattccaagcaaattccgtcaaggggaagaaaattctcataatc
ttggatctcgaagtcctgcaggaactcggcgaagcagagaaaatcggagaaccgaaacca
ttggaaaataagctggaagaagatgaaaggccccaaccgactacaatctccggtggtgga
ttttatggctccaaggttcaaaatcagcgaggggaacctcgcgtccagcctgcacgttcc
tctttgacatcgacccacgccaccatctatccgatcgaagctatctctccttattcacat
aaatggacgatcaaggcgcgttgcacgagcaaatcagcaatcaaaacctggcacaacaga
aactcggagggcaggctatttagtgtcaacttactcgatgatagtggtgaaatccgtgcc
actggattcaatgagcagtgcgacctgctctatgacgtttttcatgaaggaagcgtgtac
tatatatctagcccctgccgggttcagattgcaaagaagcaatttaccaatctgaacaat
gactacgaacttacttttgaaaaagatacagttgttgaaaaggcagaggatcagagcgat
gttccgcaagttcggttcaatttcacaaccgtgggcgatctccagtctgttgagaaggat
accaccattgacattattggtgtgctgaaagacgtcggggagactactcaaatcgtatca
aagacgacgagcaagccctatgacaagcgagagcttaccttggtcgatagctcgggtttt
tctgttcgtctaaccatctggggctccacagcattgaatttcaatgccacgccagagtct
gtaattgctttcaagggtgtcaaagtctctgattttggaggacgaagtctgagtttgttg
agttctggctcaatgactgtcgatcctgacatagaagaagctcatcgtctcaagggttgg
tatgatgctcaaggcagacacgagacattcacctcacatgccacaatgtccaatgcatcc
tcgtctgcaatgagattggatcacttgaaaacaatcgcccagatacgcgaggaacaacta
gggatgtcagaagatgcagtctacttctcgctcaaggggactgttatttatataaagcaa
gacaacatgtgctaccctgcttgcctctccgaagggtgcaataaaaaagtgacggaactg
gatcccggtcaatggcggtgcgaaagctgtgataaaactcacccacgtccagagtatcga
tacatcatgctcatcaatgttagcgaccatacaggccagctctggctcagttgcttcgat
gaggtcgggaaacagttaatgggcacgtctgcggatcagttaatggatcttcgccaaaat
ggagaaaaggccgctggagacatcttccaggaagctaattgtcgaacttggaacttcaga
tgtcgggctaagctagatcacttcggagatcagcaacgcatccgttatcaggtatcgacg
gccaaacctgtcaactactcggaggaagcatctcgcctcatggccctgattaattcatat
ggcctttcttga
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integrated database retrieval system
