Aspergillus fischeri: NFIA_087050
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Entry
NFIA_087050 CDS
T01070
Name
(RefSeq) 90S preribosome component RRP12
KO
K14794
ribosomal RNA-processing protein 12
Organism
nfi
Aspergillus fischeri
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfi03009
]
NFIA_087050
Ribosome biogenesis [BR:
nfi03009
]
Eukaryotic type
90S particles
Other 90S particles
NFIA_087050
Pre-60S particles
Other pre-60S particles
NFIA_087050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
4587204
NCBI-ProteinID:
XP_001260646
UniProt:
A1DH92
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MATLAEKLEKIKSPKLQNQHHTAVVLSAVEDTLRDQKADFSATAYFAALLALLAQSVSAT
QGIVNKDLATSVVYLLDITTEYVPAPILRSKFSQILTSLAPALSLPEVDAPLLRPSIGCL
ESLLIAQDAASWNLPHTQIGPRRAIAGLLSLAVDHRPKVRKRAQEALIKVLKNPPPSPSL
DHPAADMCAETGLRTLGDSIAAAAKHKRGRHDANSRENHDPLVIHSLQLVKTIATASGGW
PSKKIEPLCELLMNASRSSNEFITMGAFEVFEVIFSSMADEFSSSKLPRLLDAISELKPA
QNDSQLLPPWIAVLSRGYDVSAQINPEDTFEKLPALFNMISGYLASPSMNIRVSASECLI
SFLANCIPKNVILEPSVYDEKTLEKLAKAAKDLLSVKYQAAWAEVFKVCSAMFDSFKWRS
SPFLDDIVKIIGDLRSNESFHGKKQADEVLGSAVEAMGPAAVLEILPLNIIQQKNGQPGR
VWFLPILRDSVTNTNLAHFRSELVPLSEALYQKVVDYGAAEKTVEKKIFETLVQQTWAIL
PGYCELPLDLVEAFDQSFAELLSNVLYKQTELRVDICNALQTLVESNQAILSIESEEDDL
ILQRRITKATAKKNIAHLAGFASNLLAVLFNVYSQTLPHYRGYILQCINAYLSITPEKEL
NETFARVTSMLESSVVSEQEAAKQGNQQTGSGDKMPPTSHTLIDLVIAMSIYLPRSSFAS
LFALAAAILNGQTTDQQLIKKAYKLIPRLATTETGRTALLERSAELQSLMLETADKTPAS
ARRDRSLAIYELITYLPTSDLHFIPSILSEVVLGCKESNEKARTASFDLLIHLAKRTIDS
DRNPPGTKIRNSLVPHMPNDAPDAPATIEEFFTMVSAGLAGSSPHMVAASVTALSRLFFD
FHTQLEPSVRIDLVQTVELFLTSNNREIVRSVLGFVKVAVVVLPDDVLRPRLNTLVPNLM
VWNKEHKGRLRSKVKGILDRLIRRFGAPLIEGLVGEADRKLVVNIRKQRERRKRKKKEGE
GAGDEDEEDEAADNAGKAAYSNAFDKAVYDSDFSDSEDDASEIEVDEQGNTHVRGRKGKK
GKQNEQYIREMSPEDNPLDLLAPDALASISTTKPSVRFLNTGPGSRKKHAAKFGPDGRLL
IGDAENDDVDMSGAPGGDAAPGESGINAYLAAVSGPDAIRRGQKGRLKMSQAQKKKNSGG
DGMDLDDNDNDDEAPASASNHGKGPQSTRRGLGVPKTHGPSANGRIQKRRNPPRGGRQSG
RGGIRVGKRR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggcggagaagctcgagaagatcaagtctccgaagctgcagaatcagcac
catacggctgtggtgctctctgcggtggaagatacacttcgcgaccaaaaggcagatttt
tccgcgacagcttatttcgcagcgcttcttgcgttgttggcgcagtccgtgtcagctact
cagggtattgtcaacaaagatttagcaacctccgtcgtctacctgctcgatatcacaacg
gaatacgtccctgcgcccatcctccgctcgaagttctctcagatcctcaccagccttgct
cccgcgctctctctgccggaagtcgatgctcctcttctcagaccatcgattggctgcctc
gaatcgctgctcatcgcccaggatgctgcctcatggaacctcccgcacacacaaattggc
ccgcgtcgagcgattgcgggactgttgagtctggcggtggaccaccgacccaaggtccgg
aagagggcgcaggaagctctcatcaaggtcctcaagaaccctccccccagcccttcgctc
gaccaccccgcggcggacatgtgcgcagagacaggactacggacactgggcgatagcatc
gcggctgcggccaagcacaaacgggggcgtcatgatgcgaacagccgggagaaccacgat
cccctggtaatccactccctccagctggtgaagacgatcgcgaccgcatcgggaggctgg
ccaagcaagaagattgagccgctttgtgagttgctgatgaatgcgtctcggtccagcaac
gagttcatcacaatgggtgcttttgaagtctttgaagtcatcttctccagcatggcggat
gaattttcgtcttcgaagctgccccgtcttctagatgctatctccgagctcaaacccgct
cagaacgattcgcagctgctccctccctggattgcggtattgtcccgtggatatgatgtg
tctgcacagatcaacccagaggatacgtttgaaaaattgccggctctgtttaacatgatt
tcgggctaccttgcttcgccctcgatgaacatccgtgtttccgcctcggaatgcctgatc
tcttttttggccaactgcatccccaagaatgtcattctcgagccttcagtctacgatgaa
aagaccctcgagaagcttgccaaagctgcaaaagacctcctttcagtgaagtaccaagcg
gcatgggctgaggtgttcaaagtctgctctgcaatgttcgacagcttcaagtggcggtcg
agcccgttccttgacgatattgtcaagataattggggacctacgcagtaatgagtcgttc
catggaaagaagcaggctgacgaggtcctcggcagtgccgttgaagctatgggccctgcg
gcggtactggaaatccttcctttgaatatcattcagcagaagaatggccagcccggtcgc
gtgtggtttcttccgattcttagagacagcgttaccaacaccaatctcgctcacttccgc
tctgagcttgttcctctgagcgaagcattgtaccaaaaggtcgtcgactatggggctgcg
gagaagaccgttgagaagaagattttcgagacgctcgtgcagcagacctgggccattctt
cctggctactgcgagcttcctctagatttggtcgaggctttcgatcaaagttttgcagaa
ctcttgtccaacgttctttataaacaaaccgagctgcgtgttgatatatgcaatgccttg
cagaccctagtcgagtcgaatcaagctattttgtccattgagtccgaagaggacgacctg
attctccagaggaggatcacaaaagcgactgcgaagaagaacattgcccacttggctggt
tttgctagcaatttactcgctgtgctgttcaacgtctacagccagacactcccgcattac
agaggctacattctgcagtgtatcaatgcttatttgagcattacccccgaaaaggagctc
aatgaaacatttgcgcgtgttacctctatgctcgagtcctctgtggtgtcagagcaggaa
gcagccaagcagggcaaccagcagaccggctctggcgacaagatgcctcccacttctcac
actctgatcgacttggtcattgccatgtcgatctacctgccccgctcaagctttgcaagc
ctgttcgcacttgctgcagctattttgaatggtcaaacgaccgatcagcaactgattaag
aaagcttacaaactaattccccgcttggcgaccacggagactggccgcactgctctcctt
gagcgcagtgcagagcttcagtctctcatgcttgagacggcagacaagacgcccgcctct
gcccgtcgggatcgaagcctagctatctacgagctgattacctacctcccaacatctgat
ctacactttattccttccatcctctcagaggttgttctgggttgcaaagagagtaacgag
aaagcccggacagcctcctttgaccttctcatccaccttgctaagcggaccattgattcc
gaccggaacccgccaggaactaagattcgcaactctctggtgcctcatatgcccaacgac
gcccccgatgccccagcgacaatcgaggagtttttcactatggtctccgctggtttggct
ggtagctcgccgcacatggtcgctgcctccgtcacagccttatcccgccttttctttgac
tttcacactcaactcgagccctcggtccgcattgacctggtccagacagtggagttgttc
cttacaagcaacaaccgggaaatcgttcggtccgtcctcggcttcgtcaaggttgctgtt
gtcgtcctccccgacgacgttctgcgtccccgcctgaatactctagtccccaatctcatg
gtttggaacaaggagcacaagggtcgtctccgcagtaaagtcaagggtattttggatcgc
ttgatccgccggtttggcgctcctcttattgaaggactggtcggcgaggccgaccgcaaa
ttggtggtcaatatccggaagcagcgcgagcgccgcaagcgcaagaagaaggaaggcgaa
ggcgccggtgacgaagacgaggaggacgaggcggccgacaacgccggcaaagccgcctac
agcaacgctttcgacaaggccgtctacgactcagatttctccgattctgaggacgacgcc
agcgagatcgaggtcgacgagcaaggtaacacccacgttcgcggccgcaagggcaagaag
ggcaagcagaacgagcagtacatccgtgagatgtccccggaggacaacccgctggatctc
ctggctcccgacgcgttggccagcatctctaccaccaagcccagcgtccgcttcctcaat
accggccccggctcccggaaaaagcatgccgccaagttcggcccggacggccgcctcctc
atcggcgatgcggagaacgacgacgtcgacatgtccggtgcacctggcggcgacgccgcc
ccaggcgagagcggcatcaacgcctacctggccgccgtcagcggacccgacgccatccgc
cgcggccaaaagggccgtctcaagatgtctcaggcccagaagaagaagaacagcggcggc
gacggcatggacctcgacgacaacgacaacgacgacgaagccccggcctccgcatccaac
catggcaagggcccgcagtccacccgtcgcgggctcggagtgcccaagacacatggcccc
agcgccaacggccggatccagaaacggagaaatcctcccagggggggaagacagagcgga
cgcggcggcatccgtgttgggaagagacggtga
DBGET
integrated database retrieval system
