Aspergillus fischeri: NFIA_087200
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Entry
NFIA_087200 CDS
T01070
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_087200
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_087200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_087200
03041 Spliceosome [BR:
nfi03041
]
NFIA_087200
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NFIA_087200
mRNA degradation factors
5'-3' decay
Lsm complex
NFIA_087200
Spliceosome [BR:
nfi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
NFIA_087200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
4587219
NCBI-ProteinID:
XP_001260661
UniProt:
A1DHA7
LinkDB
All DBs
Position
Unknown
AA seq
119 aa
AA seq
DB search
MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPEVY
VRGNNIKYLRIPEEIVEMVKEQQQSQPQNRNRGGREGRGDRGRGGGRGGRGRGRGRGGS
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattgggtcttctgacggccgcgcaaggccaccccatgcttgtggagctcaag
aacggcgagacactgaacggacatcttgccaactgcgataactggatgaacttaatactc
aaggaggttgttcagactagccctgaaggcgaccgcttcttcagattaccagaggtctac
gtgcgaggaaacaatatcaaatacttgcgaatcccggaggaaatcgtggagatggtcaaa
gaacagcagcagagccagccgcagaatcgcaaccgtggtggccgtgagggcaggggcgat
agaggccgtggtggtggccgtggcggccgaggtcgcggccggggtcgtggtggcagttag
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integrated database retrieval system