KEGG   Aspergillus fischeri: NFIA_097390
Entry
NFIA_097390       CDS       T01070                                 
Name
(RefSeq) pre-mRNA splicing factor, putative
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
nfi  Aspergillus fischeri
Pathway
nfi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NFIA_097390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nfi03041]
    NFIA_097390
Spliceosome [BR:nfi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    NFIA_097390
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd PRP4 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st WD40_like PRTP Exonuc_VII_L
Other DBs
NCBI-GeneID: 4588595
NCBI-ProteinID: XP_001262008
UniProt: A1DB71
LinkDB
Position
Unknown
AA seq 536 aa
MHPSRQAYVEESEDTEMGIDLANIPVDRDYDIPSAAAGIPAERASAILSQFERKRRAAAM
AVPTDDNRVRARLRELGEPITLFGEGPVDRRDRLRELLTDLAERQEAAAADGDISMRGTT
EEAEEAEEEAEQQEEFYTEGSQELLNARKTIARYSLPRAKARVERLREESTIPLRTHIKH
RKAIKEKLQGFDLYGSQIAGDRPVSICRFAPDGKTIAAGNWGGGIRLLTVPNLEEKSNLN
GHTDRVGGLAWFPGATLPSSDVSESSVNLVSGGGEGNVALWSLDKDTPLATLSGHSGRVC
RTEFHPSGRYIASASFDTTWRLWDVETTVELLLQEGHSREVYTVAFNNDGSLLASGGLDS
IGRIWDLRTGRTVMILEGHVREIYGLDWGVDGYRVLSGSGDGWIKCWDLRQVRNIGGIGA
HKSVVSDVRWYKGTESAASYLPSTETNGRMDVDSNPTLTTSEQSTPATPVQPKKSGTFFV
SSGFDKNVNIFSADDWSLVKSLSGHAGNVLSTDISDDAQWIASCGHDRTVKLWGIE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgcacccttcaagacaggcgtacgtggaggagtccgaggatacggaaatgggcattgac
ctggcaaacatccccgtcgaccgcgactatgatattccctctgctgcagcgggcataccc
gccgaacgagcatctgccattctatcccaattcgagcgcaagcgacgagcagctgccatg
gcggttccgactgatgataaccgtgtgcgcgcacgactgcgagaacttggggaaccgatc
actcttttcggagaaggtcccgtggaccggagagaccgactgcgtgagcttctgacggat
ctggccgagaggcaggaagcggcggccgcggacggtgatatatccatgcgaggtacgaca
gaggaagctgaagaggcggaagaggaagcagaacaacaggaagaattctacacagaaggt
tcccaggagctactcaacgcccgaaaaacaatcgcccgctattccctaccccgagcgaaa
gcacgagtagagcgcttacgagaggaatctacaatcccattgaggacacatatcaagcac
cgcaaagcgatcaaagagaagttgcaagggttcgacctttacgggtcgcagattgcgggc
gatcgccctgtgagcatttgtcgctttgcgccagacggaaagacgatcgctgcgggcaat
tggggtggtggtatccgtttgctcactgtaccgaatctggaggagaagtcaaatctcaat
ggacatacggatcgtgtcggtggattggcgtggttccccggtgcaacgcttccttcgtcg
gatgtgtccgagtcgagtgtcaaccttgtctccggcggcggcgagggcaacgtggcgctg
tggtccctggataaagatacaccactagctacactgtcaggccacagcggccgtgtatgc
cggacagaattccatccttcagggcggtacatcgcgtctgcttcgttcgacacgacatgg
cgcttgtgggacgtcgagacaacagtcgaactccttcttcaggagggtcattcacgagag
gtttatacggtggcatttaacaatgacggttctctgctggctagcggcggtctggacagc
attggtcgaatctgggatctgcggacaggccgcacggtgatgatccttgagggacatgtc
cgagaaatttacggtctcgactggggtgtagacggataccgtgtcttgtcaggttcgggt
gatggctggatcaagtgttgggacctccgacaagtacgcaatattggtgggatcggcgca
cataaaagtgttgtgtcggatgtacggtggtacaagggcactgagtcggctgcctcttat
ctgccatccactgaaaccaacgggcgaatggacgttgacagcaacccgacactcacaacg
agcgagcagtcaacgccagcaacccccgttcaaccaaagaagtcaggcacattctttgtc
agcagtggattcgacaagaacgtcaatatcttcagcgcggatgattggtctctggtcaag
tccttgagtggccatgcaggcaatgttctcagtacagacattagtgatgatgcccagtgg
attgccagttgtgggcacgatcggactgtgaagctctggggcatagagtga

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