Aspergillus fischeri: NFIA_097520
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Entry
NFIA_097520 CDS
T01070
Name
(RefSeq) pre-mRNA splicing helicase, putative
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_097520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfi03041
]
NFIA_097520
Enzymes [BR:
nfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NFIA_097520
Spliceosome [BR:
nfi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
NFIA_097520
Complex C
U5 SnRNP specific factors
NFIA_097520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
BRR2_plug
ResIII
Helicase_C
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
4588442
NCBI-ProteinID:
XP_001262021
UniProt:
A1DB84
LinkDB
All DBs
Position
Unknown
AA seq
2209 aa
AA seq
DB search
MADQNISQYKYSAMSNLVLQADRRFISRINDEPTGDPESLAGRISIREMGSRVAHDDAPK
TKKKPVGPTDIERGAIREGEDVLAREQRKRRGQQQLRGQGILSAADALIEGLKYRPRTPA
TRATYDLILTMTASHLGDVPHEVVRSAADAVLELLKDEDMKDFDKKKEIDDLLGSSMSPK
EFNELVNLGKKITDYDAQDEDEEMEGGMDGQEEAELDERQGVAVVFDEEDEDDERMGTVT
EVRDEDDLTDDEEPDEQEAPDIEAATTEKANIEGLEAEEEMVIDGGLDRADQRRNKNLIV
PARQIDAYWLQRQIGSAYTDAHIQQEKATQALEILGGKAEDGTEKSLRDVENDLMELFDY
EHPDLVAKFVMNRDKIVWVTRWRRVAEDADARHLVESEMVEAGHRAILDEIRGKTVRDEA
AGRPEKKIKLDLMDVDVPSAPAPEQKPAEGGLVGGLQPKRLINLENLVFHQGNHLMTNPN
VKLPQGSTKRTFKGYEEIHVPPPKPKRDPGEKNIPATELPEWARIGFGSAKELNRVQTKC
YPAAFHDDGNMLVCAPTGSGKTNVAMLTILREIGKNRNPETGEIMLDDFKIIYISPLKAL
VQEQVGNLGKRLEPYGIRVSELTGDRQLTKQQIAETQLIVTTPEKFDVITRKASETSYIK
LVRLIIIDEIHLLHDERGPVIESIVSRTIRKVEQTGEPVRIVGLSATLPNYRDVASFLRV
DPNKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQLKMMNDICYNKVLEQVGQRRNQMLIFV
HSRKETAKTAKYIRDKALEMETIGQILRSDAASRAILAEEAESVDDASLKDLLPYGFGIH
HAGLSLADRDSVQALFADGSIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELS
PQDVLQMLGRAGRPQYDTFGEGIIITSQTEIQYYLSLMNQQLPIESQLMSKLADNMNAEI
VLGNIRNRDEGVEWLGYTYLFVRMLRSPGLYSVGADYENDDALEQKRVDLVHSAAVILER
AGLIKYEKKTGRLQSTELGRIASHYYIGHNSMLTYSQHIQPSISTIELFRIFALSDEFKY
IPVRQDEKLELAKLLGRVPVPVKESIDEPHSKINVLLQAYISRLKLEGLALMADMVYVTQ
SAGRILRALFEISLKKGWSSVAKTALDLCKMAERRMWPTMTPLRQFPHCPRDILQKAERI
DVPWASYFDLDPPRMGELLGMPKAGRTVCDLVSKFPRLEVQAQVQPVTRSLLRVELTITP
NFVWDDALHGTAQDFWILVEDCDGEEILFHDQFILRKDYAQAEMNEHLVEFTVPITEPMP
PNYFISLVSDRWMHSETKIAVSFQKLILPERFPPHTPLLDMQRAPVKALKREDYQQLYPE
WQLFNKIQSQTFKSLYDTDDNVFLGAPTGSGKTVCAELALLRHWATGKGGRAVYIAPFQE
LIDHRHADWEKRLGNLGGGKNIVKLTGETTADLKLLDQADLVLATPTQWDVLSRQWQRRK
NVQSVQLFIADELHMLGGYGGYVYEVVVSRMHSIALQLENGMRIVGLSVPLANARDIGEW
IGANKHTIYNFSPHARPVPLELHIQSFSIPHFPSLMLAMAKPAYHSILQLAPDKPALVFV
PNRKQTRSTAIDLLAACAADDNEDRFLHADVNELAPLLNRIQERTLAESLSHGIGYYHEA
LSATDKRIVSHLFTIGAIQVLLASRDVCWDLNLTAHLVIVMGTQFFEGREHRYIDYPISE
ILQMFGKATRPKEDKIGRGVLMVPSVKREYYKKFLNEALPVESHLQLYLHDAFVTEISTR
TITSTQDAVDWMTYTYFYRRLLANPSFYGLSDISHEGLSTFLSELVENTLRELSEAKIID
LDEEDDSVSPLNAAMIGAYYNISFITMQTFLLSLSARTKLKGILEIITSATEFESIQMRR
HEDHILRRVYDRVPVKMSQPAYDSPHFKAFVLLQAHFSRMQLPIDLAKDQEVIVSKVLNL
LSACVDVLSSEGHLNAMNAMEMSQMVVQAMWDRDSPLKQIPHFGPEAIKVANEYNINDIF
EFMEAMDPSENKDYPTLVKRLGLDNSQLAQAAAFTNEKYPNLDLDFQVEDPENITSGEPA
YLKIKIEREVEEDEEPDTTVHAPFYPGKKMENWWLVVGDEKTKNLLAIKRVTIGRKLELR
LEYIVPTPGEHELTLYLMCDSYVGVDQAPTFTVTAAEGMEEDESEEEEE
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaaaatatctcccagtacaagtactcggcgatgtccaacctggttctccag
gcggaccgtcgtttcatctctcgcatcaatgatgaacccaccggagacccagaatccctt
gctgggcgcatcagcattcgggagatgggttcaagagtcgcgcatgacgatgcgccaaag
actaagaagaaacccgtcggacctacagatatcgagcgaggtgcgatccgagaaggcgag
gatgtgctcgctcgagaacagagaaaacgtcgcgggcaacagcaattacgcggccagggt
attctctccgctgccgatgctctcatcgaagggttgaaataccgccctcgaacgcccgcc
acccgcgcgacctacgatcttatccttacaatgactgcaagccatctgggtgatgtccct
cacgaagtcgttcggagtgctgccgatgctgtgttggagctattgaaggacgaagatatg
aaggacttcgacaagaaaaaggagattgacgacttgctcggcagctccatgagtccaaaa
gagttcaacgaacttgtaaatttgggaaagaagattacggactacgatgcgcaggacgag
gacgaagagatggagggcggaatggatggccaagaagaggcagagctcgacgaacgtcag
ggtgttgccgtcgtcttcgacgaggaagatgaggatgatgagcgcatgggcactgtcacc
gaagtccgagacgaggatgacctgaccgacgatgaagagccagatgaacaagaagctccc
gatattgaggctgcgacgaccgagaaagcgaatatcgaaggtctcgaggctgaggaagag
atggtcatcgacggtggactagatcgcgctgaccaacggcggaacaagaacttgatagtt
cctgcccggcaaatcgacgcttactggttacaacgccaaattggttctgcgtataccgat
gctcatatacaacaggagaaggccacacaggctttggaaatacttggtggcaaagcggag
gacggcacggagaaatcgctgcgagacgtggaaaacgacctgatggaacttttcgattat
gaacacccagaccttgtcgccaaattcgtcatgaaccgtgataagattgtgtgggtaacg
cgttggcgcagggttgccgaagatgccgatgctcgccatctcgtcgaaagtgagatggtt
gaggctggccaccgagctattttggacgaaattcgaggcaagacggttcgcgatgaagcg
gcaggtcgtcccgagaagaagatcaaactcgatctgatggatgtcgatgtccctagcgcg
ccggctcccgaacagaagcctgcagagggtggcttggtcggcggtctgcagcccaagagg
ctgatcaacctggagaaccttgtcttccaccaaggcaaccatctgatgaccaacccgaat
gtcaagctacctcaaggttccaccaagcgaacattcaaaggatacgaggagattcatgta
ccaccgcccaaacccaagcgagaccctggggagaagaacatccccgccactgaactgcct
gaatgggcccgtatcggctttggcagtgccaaggagctcaaccgagttcagaccaaatgc
tacccagctgccttccacgatgatggcaatatgcttgtctgtgctcctacgggatctgga
aagaccaatgttgccatgcttaccatccttcgcgagatcggcaagaatcgcaacccggag
accggggagataatgcttgatgatttcaaaatcatttatatctctcccttgaaagctctg
gtccaggagcaagtcggcaacctcggcaaacggctcgagccctacggcattcgagtttcc
gagctgactggtgatcgccaactcacaaagcaacagattgctgaaacccagctgattgtc
acgactcccgaaaaatttgacgtcattaccagaaaggcgtctgagacgagttacatcaag
ctcgtgcgtctgatcattattgatgaaattcatttgcttcatgacgagcgaggacccgtt
atcgaaagtatcgttagtcggacaattcgcaaggtagagcagaccggagaacctgtccgc
atcgttggtctcagtgcaactttgccaaactaccgtgatgtagccagcttcttacgagtc
gaccccaataaaggcctgttccactttgatggttcttatcgaccatgcccgttgaagcag
gaattcattggtgtcaccgacaagaaagctatcaagcagctgaagatgatgaacgatatt
tgctataacaaggttctcgagcaagtcgggcagcgaagaaaccagatgctcatcttcgtt
cactctcgaaaggaaacggcgaagacggccaagtatatcagggataaagcattggagatg
gagacgattggccagattttgcgtagcgatgctgcaagcagggctattttagcggaagaa
gccgagtccgtcgatgatgcatcgctgaaagacctgttgccatacggtttcggtatccac
catgcaggactgagtcttgcggatcgtgactcagtccaagcgctgttcgctgatggcagc
attcaagtcctcgtatgcacggcaactcttgcctggggtgtcaacctgcccgcgcatacc
gttatcatcaaaggaactcaggtatattcaccggagaagggtagctgggttgagcttagc
cctcaggatgtcctccagatgctgggacgagctggtcgacctcaatacgacacgtttggt
gaaggtattatcatcacatcccagactgaaattcagtactacctctccctcatgaaccag
caattgccgattgagagtcagctcatgagcaaacttgctgataacatgaatgcggagatc
gtccttggaaacatccgcaatcgcgacgagggagtggagtggctgggttacacttacctt
tttgtccgtatgctccgctcgcctggcctgtacagcgtgggcgccgattatgagaacgac
gacgcgttggagcagaagcgggttgaccttgttcactccgcagccgtcatcttggaacgg
gccggacttatcaagtatgagaagaagactggacgcctgcaatccaccgagttgggacga
attgcttcgcattactacattggccacaattccatgttgacctattctcagcacattcaa
ccatccatctcgaccattgagctcttccgcattttcgccctcagcgacgaattcaagtac
atccctgttcgccaagacgagaagttggagttagcgaaactcctcggtcgtgttcctgtt
cctgtgaaggagagcattgatgaacctcattcgaagatcaacgttttgctgcaggcctac
atttccagactgaagctagaaggacttgctttgatggcagacatggtgtatgtcactcag
tccgcgggtcgtattctgagggccctttttgagatttccttgaagaaaggctggtcatct
gtcgcgaagactgctctcgacctctgcaagatggcggaacggcggatgtggccgaccatg
acaccactgcgtcaattccctcactgtccccgggatatcctgcagaaagcggagagaatc
gacgtgccttgggccagctatttcgacctcgaccctcctcgcatgggcgaacttcttggt
atgcccaaggctggacggaccgtgtgtgatctcgtgtccaagttccctcgtttggaagtc
caggcgcaagttcagcctgtaacccggtcattgcttcgagtggagcttaccatcactccg
aattttgtgtgggatgatgctttgcacggaacagcgcaagacttttggatcctcgtcgag
gactgtgacggcgaggaaatcttgttccacgatcaattcatcctccggaaggactatgcg
caggccgagatgaacgagcacctagtcgaatttacggttcccattaccgagcctatgccc
cctaactacttcatctctctcgtttccgatcggtggatgcactcagagaccaagattgcg
gtatctttccagaagctgattcttccggagcgattcccgccccatactcctttgctggac
atgcaacgggcgcccgtcaaggcactgaagcgtgaggattaccagcaactctatcctgag
tggcaactcttcaacaagatccagtctcaaactttcaagtcgttgtatgataccgacgac
aatgtcttcctcggtgctcctacgggcagcggcaaaactgtttgtgctgagcttgcattg
ctgcggcattgggcaaccggaaagggcggcagagccgtctatattgctcctttccaagaa
ttgattgatcaccgacatgcagactgggagaagcggttgggtaacctcggtggcggcaag
aatatcgtcaagctgactggagagaccactgcggatctgaaattgctggatcaggcagat
ctggttctcgccacgccgacgcagtgggatgttctgtcccggcaatggcaaaggcgcaag
aacgtgcaatccgtgcagctgtttatcgcagatgaactccatatgcttggaggctatgga
ggatatgtgtacgaagtagtggtgtcgcgcatgcattctattgcccttcagctagagaac
ggtatgcgcatcgttgggctgagcgtgcctcttgctaacgcccgtgacatcggcgagtgg
attggtgcgaacaagcatacaatttacaatttcagccctcacgctcgccctgtgcctctt
gagcttcatattcagtccttcagcattccccacttcccctcactcatgctggctatggct
aaaccggcatatcactcgattttgcagttggctccggacaaacccgcgcttgtgtttgta
cccaatcgcaagcagacaagatcaacagctattgatctcttggctgcttgcgctgcggat
gataacgaagaccgattccttcatgctgatgtgaatgaacttgcgccactactgaatcgg
attcaggaacggacgctggctgaatcgctctcccacggcattggatactatcacgaagct
cttagcgctactgacaagcgcattgtctcgcatctcttcaccattggtgcgattcaggtc
ctacttgcttcacgcgatgtctgctgggacctgaatctcacggcacatcttgtaatcgtc
atggggacacagttctttgaaggccgcgagcaccgttacattgattatcctatcagcgaa
atcctgcagatgttcggcaaagctactcgccctaaggaggacaagattggccgaggtgtt
ctgatggtaccttcagtcaagcgcgagtattacaagaagttccttaacgaagctttgccc
gtcgagagtcatttgcaattgtacttacatgacgcatttgtgaccgagatcagcacaagg
acaatcacttcgacacaggacgccgtggattggatgacttacacgtatttttaccgtcgt
ctccttgccaaccccagcttctacggtctgagtgacattagccacgaaggtctcagcact
ttcttgtccgagttggtggagaacacattgagggagctgtcggaggctaagattattgac
ctggatgaggaggatgacagcgtctcgcccctcaatgcggccatgattggcgcttactac
aacatctccttcatcaccatgcagaccttcctcctgtcgctcagcgctcgcacgaagctc
aagggtattctggagattatcacctcagccacggagttcgaatcaattcagatgcggaga
cacgaagaccacattctgcgacgagtgtacgatcgtgtgcccgtcaagatgtcgcaaccc
gcctacgactcgcctcacttcaaggcctttgttctcctgcaagctcacttctcccgcatg
cagctgcccattgatcttgccaaggaccaggaggtcattgtcagcaaggttctcaacctt
ctcagtgcatgtgtcgatgttctctcatccgagggtcacttgaacgcaatgaatgccatg
gagatgtcacagatggtggtccaagccatgtgggatcgggacagccctcttaagcagatt
cctcactttggccctgaagccattaaggtggccaacgagtacaacatcaacgacatcttc
gaattcatggaagcgatggatccatccgagaacaaggactaccccacgttggtcaagcga
cttggtctcgataactcacagttggctcaagctgccgcgttcacgaacgagaagtatccc
aaccttgaccttgacttccaggtggaggatcccgagaacattacatccggcgagccggcg
tatctcaagatcaagattgaacgggaagtcgaagaggacgaggaacctgacaccacagta
cacgcgccgttctaccctggcaagaagatggagaattggtggttggttgtgggagacgag
aagacgaagaatttgcttgccatcaagcgagttaccatcggacgcaaattggagttgcgc
ctggagtacattgtgcccacgcctggtgagcatgagttgacactgtacctaatgtgcgac
agctatgtgggtgtagaccaagcccccacgtttactgtgacggcagctgaaggcatggaa
gaggatgagagcgaggaagaagaggagtaa
DBGET
integrated database retrieval system
