Aspergillus fischeri: NFIA_103570
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Entry
NFIA_103570 CDS
T01070
Name
(RefSeq) transcription factor, putative
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
nfi
Aspergillus fischeri
Pathway
nfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NFIA_103570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfi03019
]
NFIA_103570
Enzymes [BR:
nfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
NFIA_103570
Messenger RNA biogenesis [BR:
nfi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NFIA_103570
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NFIA_103570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
4593323
NCBI-ProteinID:
XP_001266766
UniProt:
A1CW67
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MADGTYRFQQPGAGQFFFQTQPQQHSHQRHIARNGTNSPTGRLKFNHDTPSPSRSPPLSQ
AAALNPFNMYSQTHQGQHVMMNGGQAHQRFGMQIPKFQSQSHHPHHTQQPHHHTHHNQAS
HNINHQHNFSSGALASATPHFTPSHIQNGAHTNVDEDIDESMNEHWQQQLQLAAESRQAS
SPHYHARSVAQQAKGIQIAPSQPETQEQVPDGQNGVVKAKASSRQGWHALDFGGQGLRAL
STSLFNYVFLEKLYLNHNKLKALPPTIGQLRKLNHLDLSGNDLTELPEEIGMLTNLKKLY
LFDNNIRTLPYEMGYLYRLETLGVEGNPLNDVLKSHIMKEGTKALIKYLKEEMPVHLPPP
DRDWIVLDETASSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNEL
RSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFK
ASKFILLDKQLINFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNA
HLYWDPAFKDVKLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPA
PSMQYASGDQIPLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPF
KLKSAYGAIGELPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHF
PSDHIALLAEFTVKGKKGKVVEADFGPQRN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtacctacaggttccagcagcctggggccgggcagttcttctttcaaacg
caaccacaacagcactctcaccaacgacatatcgcacgaaacgggacgaattcacccact
ggaagactgaagttcaatcacgatactccctcaccttcccgatctcctcctctcagccag
gccgcggctctcaatccattcaacatgtacagccaaactcatcaaggacagcatgtcatg
atgaatggcggccaagcccatcagcggtttggcatgcagatccccaagtttcagtcgcag
agtcatcacccgcaccatacgcagcaacctcatcaccacacgcaccacaatcaagcttca
cacaacatcaaccaccaacacaacttctcgagcggggcattggcttccgcgactccccac
tttaccccaagccacatccaaaatggggctcacactaatgttgacgaagatattgacgaa
tcgatgaatgagcactggcagcaacaacttcagttggccgcggaatcacggcaggccagc
tcgccccactaccatgcccgatctgtcgcgcaacaagccaagggcatccagattgcccct
agccaaccggagacacaagaacaagtccctgacgggcagaacggggtggtcaaggccaag
gcatcttcacggcaaggttggcacgccttggatttcggcggacagggactgcgcgcgctg
tccacgtctctgttcaactatgtcttcctggagaaattgtacctgaatcataacaagctg
aaggccctcccaccgaccatcgggcagcttcggaaattaaatcacttggacctgtcaggc
aacgacctcaccgagcttccagaggagatcggcatgctcacgaatctgaagaagctctac
ctgttcgacaacaatatccgcacacttccttacgagatgggctacctctacaggctggaa
acactcggcgttgagggcaacccactgaatgatgtcttgaagtctcacatcatgaaagag
ggtaccaaggctttgatcaaatatctcaaggaagagatgccagttcacctcccacccccg
gaccgggactggattgtcctcgacgaaaccgccagctcctcgaaccatcgtactgacaaa
gttactgtcttgtcatacaacacactctgtgattcctccgcgactcagtcacactacggc
tacgctccagctcgcgttctttcctgggagtttagaagggagctcatcctaaacgagctc
aggtctcacgattcggatatcatttgtcttcaggaaatcgaccaaggaagctataatgaa
tatttccgggaacagctggcttacaatgattacaagggtgtttactggccacgaggaagg
gctatgggcatgcaggaggaggacgccaaatgcgtggatggatgtgccaccttcttcaag
gccagcaagttcatccttctcgacaaacagctgatcaattttggccagacagccgtgcgg
cgcccagatgcaaaaggtcaagacgacatctataaccgactctggcagaaggatcatatt
gcagttgtcgtattccttgaaaacaggcagaccggttcgcggttcattgtcgtgaatgcc
cacctctactgggatccagcgttcaaggatgtgaaactgattcagacggctattctgatg
gaagaactcaccaaattgtcggagacatatgccaaatggcctccgtgcaccgacaaggcg
gctttccgattctccaaagaggagggacaatcagaaacgccacctctggaggaaccggcg
ccatccatgcagtatgctagtggcgatcagatccctctcctgatgtgtggagatttgaac
tcgtctccgggatccgcagcatacaatctgattgcgcacggtcggctcgacgaggagcac
ccggatttggagaagcgtctttacggcaatctcagcaaagtcggtatgacgcatcccttc
aagctgaagtccgcatatggagctattggcgaacttcccttcacgaactacacgccagac
ttcaaagatatccttgattatatctggtattcttcaaattcacttcatgtttcggcgtta
ctcggagaggtggacaaggactatctacagagggtgcccggattccccaattatcatttt
ccaagtgatcatatcgcattgctggcggagtttacagttaaagggaaaaagggtaaggtt
gtggaggcggactttgggccgcaacggaattga
DBGET
integrated database retrieval system
