Aspergillus fischeri: NFIA_104530
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Entry
NFIA_104530 CDS
T01070
Name
(RefSeq) RNA polymerase II transcription factor related protein, putative
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nfi
Aspergillus fischeri
Pathway
nfi03022
Basal transcription factors
nfi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFIA_104530
09124 Replication and repair
03420 Nucleotide excision repair
NFIA_104530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfi03021
]
NFIA_104530
03400 DNA repair and recombination proteins [BR:
nfi03400
]
NFIA_104530
Transcription machinery [BR:
nfi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NFIA_104530
DNA repair and recombination proteins [BR:
nfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NFIA_104530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Rx_N
DUF5357
PIN_8
Motif
Other DBs
NCBI-GeneID:
4594063
NCBI-ProteinID:
XP_001266862
UniProt:
A1CWG3
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAPPSGSAAYKKKDGTLTMSQDGQSISWIPAAGGATGTITIPVSQITNLQQTPASNPKVM
LKIFVLPPNTPNDSPDQYVFSFTAGANARAEANAIKDALSAAIQAAKTAASATPTPTPGR
TGTPAGGEGLSAAMAIASAVSSAGRAPKPWDDDQRLKADVELQQSLLKADANLQRMFMES
LHTKPDTLSASQFMSQFWSTRLHLLRAHAIERSQTRGSYNVLSSLKPRVEDNVTKLNISK
EQIQLIFSQHPLVKRVYDENVPKLSEQQFWSRFFQSRLFKKLRGERISENDATDAILDKY
LREDEQANLEREAHVPHFLDLAGNEVNNSQRRGNRPDLDMRPSGVDKVPIIRTLNTLSEK
IMANVAPVDRDPSAPVGIDEETYNELQLRDLRGDDEQNRILLNIRDQSRFFSQAKVTEDE
QSRLFAKQDPDQILRDLRGQIDRDLPTDGTAPLGKLVEPEELEDEDEQKHDQRVGSQANL
QRASKQILDAIRDRRNQTEATSTGGTYGLSTNLYDRLTLTHATTTEFLHQFWQAFLSGNP
DRAAEVASLVESLNRAMERIQSVANDAEAERQVEVNRLKQHAREVLEATGKKIRLNLAGV
TGGEKAVKQLLGFTIRALETALAKYNTAYTEEMQRLQSLENR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcacctccgagcggatcggcggcatacaagaagaaagatggcaccctgaccatgtct
caggacggccagtccatctcgtggattcctgcggctggcggcgctaccggaacaattacg
attccagtttctcagatcactaatctacagcaaaccccggctagtaaccccaaagtgatg
ctcaagatcttcgttctccctcccaacacgccgaatgattccccggatcaatacgtcttc
tcctttacggccggggccaacgcccgtgcggaagcgaacgccatcaaagatgcactcagc
gccgccatccaggccgccaaaaccgccgcgagtgcgactccgaccccgacacccggtcgg
acaggaacacccgccggcggggaagggttgtcagccgccatggcgatcgcaagtgcggtg
tcctcggccgggcgggccccaaaaccctgggatgacgaccagcggctcaaggcggacgtg
gagctgcagcagtcgctgctcaaggccgatgcgaacctgcagcgcatgtttatggagtcg
ctgcacaccaaaccagataccctgtccgcctcgcagttcatgtcgcagttctggtcgacg
cggctgcacctgctgcgggcgcacgcgatcgagcggtcgcagacgcgcggctcgtacaat
gtgctatcctcgctgaagccgcgggtcgaggacaacgtgaccaagctcaatatcagcaag
gagcagatccagctcattttcagccagcatccacttgtgaagagggtatatgatgagaat
gtgccgaagctgagcgagcagcagttctggtcgcgattctttcagagtcgtctgttcaaa
aaactgcgcggcgagcgcatctccgaaaacgatgcgacggatgccattctcgacaaatat
ctgcgcgaggacgagcaggcgaatctcgagcgggaggcgcacgtgccgcactttttggat
ctggcggggaacgaggtcaataacagccagcggcgcgggaatcggccggatctggacatg
cggccgtcgggggtggacaaggtacccatcattcggacgctgaatacgctgagcgagaag
atcatggcgaatgtggcgccggtggatcgcgacccgtcggcgcctgtcggcattgatgag
gagacgtacaatgagctgcagttgcgggacttgcgcggggacgatgaacagaacaggatt
ctactgaatatccgggatcagagtcggtttttctcgcaggccaaagtaaccgaagatgag
cagagtcggctgtttgccaagcaggatcccgaccagattctccgtgatctacgtggccag
atcgaccgggacctgccgaccgatgggacagcgccattggggaagctggtggaaccagag
gaacttgaagatgaggacgagcagaaacatgatcagcgggtcggatcgcaggccaacttg
cagcgcgcatcgaagcagatccttgacgccatccgcgaccggcgcaaccagacggaggct
acatctactggggggacgtacggattgtcgaccaatctgtatgatagattaaccctgacg
catgcgacaaccacggagttccttcaccaattctggcaggcttttctgtccggaaatccc
gatcgtgcggctgaggtagcatcgcttgtggaatcgctgaaccgggccatggaacgcatc
cagtctgtcgcaaacgacgccgaggctgagcgccaggtggaagtgaaccgactcaagcag
catgcacgagaggtgctagaggctactggcaagaagatccgcctcaatcttgcgggagtt
acaggtggagagaaggctgtcaagcagttgctggggttcaccatccgagcattggagact
gctttggccaagtacaatacggcatacactgaagaaatgcagcgattgcaatcgctggaa
aatagataa
DBGET
integrated database retrieval system
