Aspergillus fischeri: NFIA_108690
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Entry
NFIA_108690 CDS
T01070
Name
(RefSeq) snRNP assembly factor, putative
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nfi
Aspergillus fischeri
Pathway
nfi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NFIA_108690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfi03041
]
NFIA_108690
Spliceosome [BR:
nfi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
NFIA_108690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
IFT43
Motif
Other DBs
NCBI-GeneID:
4593743
NCBI-ProteinID:
XP_001267273
UniProt:
A1CXM4
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSKRQAELSLEDEPAVGSPVSKKARVEDELEEGDPRNGALPLRRASGQQMEEHERKGQNI
LAAADHEEEEMEEAIPENAEVPESSDVDEDRPVIAAPKRQSEPMEGYSDLYLDTINREIL
DFDFEKLCSVSLSNINVYACLVCGKYFQGRGPKSYAYFHALEVGHHVFINISTKKVYVLP
EGYEVKSKSLDDIKYVVDPHYSKEEVSKLDKEVHDAFDLAGNRYRPGFVGMNNIKANDYL
NVVVQVLAHVFPIRNYFLLHQFPVPGTPELALRFSTLVRKLWNPKAFRSHVSPHELLQEI
ALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQGHLRIESQAI
TAHSDTQNARLVFTESGTINSQTTPFLILTLDLPPTPLFQSANRESIIPHVPLTTLLNKY
NGITASEKLAHRVRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYV
EPNPEIWPPGEPILYDLVANIILDPTVAAPGTTEDAAEKGLTAAGGTSSAGAGAGSERVA
WLVQLHDKAMAEENRRHQSQGAGEQQGPEWLEIQDLFVKKAESETLFTREGYLMVWERRK
IPGMNNRKGKGAAK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagacaggcggaactgtcgcttgaggatgagcctgcagtaggctctcctgtt
tcgaagaaggctcgtgtggaagacgagcttgaagaaggcgacccccgcaacggagcattg
cctttgcgacgagccagtggtcagcaaatggaggagcatgaacgcaaaggacagaatatt
cttgcagcagctgatcacgaagaggaagagatggaagaggcaattccagagaacgccgaa
gtccccgaatcgtccgatgtcgacgaggaccggccagtcatcgcagcgccgaaacgccaa
agtgaacctatggaaggctacagcgacctttacctcgacacgatcaatcgcgaaattctc
gattttgactttgagaagctgtgctctgtcagtctttcgaatatcaacgtgtatgcctgc
ctcgtatgcggcaaatacttccagggtcgggggcccaagtcgtatgcgtactttcacgct
ctcgaagttggacatcatgtcttcatcaacatatcgacaaagaaggtttatgtccttcct
gaaggatatgaagtcaagagcaaaagtttggatgatatcaaatatgtggtagatcctcac
tactcaaaagaggaggtttctaaattggataaagaggttcatgatgcttttgatcttgca
ggtaatcgttacagacctggcttcgtgggaatgaacaacatcaaagccaacgattatctc
aacgttgtcgtccaggtcttggctcacgttttcccaattcgcaactatttcctgctgcat
caatttcctgtaccaggcacgccagagttggcccttcgtttcagcacattggtacgcaaa
ttatggaatcccaaggctttccgctcgcatgtttcgccacacgagttgctgcaggagatt
gcgctccggtcatcgaagcgcttcacccttacccagcaatcggatccagtagaattcctc
tcctggtttttaaacaatctacacctttccctaggtggttcgaagaaaccatcgtcgacc
ccgacgagtgtgatacaggctgctttccaaggtcacttgagaattgaaagtcaagccatt
actgcgcactcagatactcaaaacgcccgtctggtcttcaccgaatcaggcactatcaat
agccaaaccaccccgttcctcattttgactctggatcttccgccaacacccctctttcaa
tccgcgaaccgagaatccatcatcccccatgttcccctcacaactcttctgaacaagtac
aacggtattactgcctccgagaagctggctcaccgtgtccgacatcgccttctccatcct
ctacccccttacctcttattccacatcaaacgattcagcaagaacagatttgtttctgag
cgcaatcccactattgtcactttcccgtcgccgcgctctctagatatgtcgccgtacgta
gagcctaaccctgaaatctggccacctggcgaacccatcctatatgacctagtcgccaac
attatcctggatccaactgtggcagcaccaggtaccactgaggatgccgcagagaagggc
ctcaccgctgcgggcggaacatcgtcagctggcgccggtgctggcagtgagagggtggct
tggctcgtccagctccacgacaaggccatggcagaggagaacagacggcaccaaagccaa
ggtgccggggaacagcaaggacctgaatggctggagattcaagatctatttgtcaagaag
gctgagagtgagactctgtttacgcgggaaggctatctgatggtttgggagcggcgaaag
atccctggtatgaataaccggaaaggcaagggcgcggccaagtga
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