| Entry |
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| Name |
(RefSeq) DNA-dependent RNA polymerase II RPB140
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:nfi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NFIA_114650
09124 Replication and repair
03420 Nucleotide excision repair
NFIA_114650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:nfi03021]
NFIA_114650
03400 DNA repair and recombination proteins [BR:nfi03400]
NFIA_114650
Enzymes [BR:nfi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NFIA_114650
Transcription machinery [BR:nfi03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NFIA_114650
DNA repair and recombination proteins [BR:nfi03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NFIA_114650
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1255 aa
MAEYDDAYEEEFYDEMEEGITSEDCWTVISSFFDTKGLVSQQLDSFDEFISSTMQELVEE
QGQVTLDQTLPPSDDEDDPVVLRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLT
YASPLYLGITKRIMEGRERLIADRDEDDVAPDADEDRKARGTYLQWEQKELPADQAKEET
VFIGKMPIMLKSKYCILKDLSEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNTVQ
VFKKAPPSPTPYVAEIRSAVEKGSRLLSQLSLKLFAKGDSAKGGFGPTIRSTLPYVKTDI
PIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSS
QSSMNHERRVRYAREIMQKELLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDRD
HFGKKRLDLAGPLLANLFRVLFTRVTRDLQRYVQRCVETNREIYLNIGIKASTLTGGLKY
ALATGNWGEQKKAASSKAGVSQVLSRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTHW
GLVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVLEEFEPQVTPNATK
VFVNGVWVGVHRDPAHLVNTMLSLRRRNMISHEVSLIRDIREREFKIFTDAGRVCRPLFV
VDNDPKSENCGSLVLNKEHIRKLEQDKELPADLDPEDRRERYFGWDGLVKSGVVEYVDAE
EEETIMIVMTPEDLEISKQLQAGYALPEEDDPNKRVRSILSQKAHTWTHCEIHPSMILGV
CASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFDQRMETMANILYYPQKPLATTRSMEF
LRFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYTDTEKMVGLTVV
ERFEKPMRSDTIGMRKGTYDKLDEDGIIAPGVRVSGEDIIIGKTAPLAPEAEELGQRTKA
HTKLDVSTPLRSTENGIVDQVLVSTSNDDLKFVKVRMRTTKVPQIGDKFASRHGQKGTIG
ITYRQEDMPFTREGVSPDLIINPHAIPSRMTIAHLIECQLSKVSALRGFEGDATPFTDVT
VDSISRLLREHGYQSRGFEVMYNGHTGRKLVAQVFLGPTYYQRLRHMVDDKIHARARGPT
QILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLFDVSDPFRVHICDDCGLMTP
IAKLKKGLFECRLCNNKHRISQVHIPYAAKLLFQELAAMNIAARMFTNRSGVSVR |
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| NT seq |
3768 nt +upstreamnt +downstreamnt
atggccgaatacgatgatgcgtacgaggaggagttctacgatgagatggaggaggggatc
acgtcggaggactgctggacggttatctcctccttcttcgacacgaagggtttggtatcg
cagcagctggactctttcgatgagttcatctcatcaacgatgcaggagctggtagaggaa
caaggccaggtcacactcgaccagacgcttcctccttccgatgatgaagacgatcccgtc
gttctccgtcgatacgagctcaagttcggaacagtcatgctctctcgcccctcggtcact
gaaggtgatggtgcgactaccatcatgttgcctcaggaggctcgtctgcgaaatctcacc
tacgccagtccgctctacctcggcatcacaaagcgtatcatggaaggtcgagaacggctg
attgcggatcgtgatgaggacgacgtggcgccagatgcggacgaggatagaaaggcccgt
gggacatacttgcagtgggaacagaaagaactccccgctgatcaggcgaaggaggagacg
gtgttcatcggaaagatgcctattatgctcaagtccaaatactgtatcctcaaggatctg
agcgagcaggcgctttacaactggaacgagtgcccctacgactctggtggttacttcatc
atcaacggaagtgagaaggttttgattgctcaagagcgaagcgccggaaacacagtgcaa
gttttcaagaaggcgccaccgagtcctacaccctacgttgctgagattcgaagtgcggtc
gagaagggttctcgactactttcgcaattgtctcttaagctttttgctaagggagacagc
gcgaaaggcggatttggccctacgatcagatcgactctaccctacgttaagacggatatt
cccattgttgtcgttttcagagcactgggtgtggtttcggacgaggatatcctcaaccat
atttgttacgacagaaatgacacccccatgctcgagatgctgaagccttgcatcgaggaa
ggtttcgtcatccaagaccgcgaggtcgctttggatttcatcgccaaacgtggatcttct
cagtccagcatgaaccacgagcgtcgtgtcaggtacgcacgagagattatgcagaaggag
ttacttccccatatttcccagagcgagggtagcgagacgcgaaaggccttcttcctcggt
tacatggttcacagactcttgcagtgtgctctcggtcgtcgcgatgtagatgatcgtgat
cacttcggaaagaagcgtcttgaccttgctggccctctgcttgccaatctcttccgagtt
ttgttcacgagagtcactcgggatctccagcgatatgtccagagatgtgtggaaactaat
cgtgaaatctacttgaacatcggtatcaaggccagtaccttgactggaggtctgaaatat
gccctcgccaccggtaactggggagaacagaaaaaggcagcaagttcgaaggcaggtgtc
tcgcaggtgctgtctcgttacacctatgcctccaccttgtcacatcttcggcgtaccaac
acgccaattggtcgtgacggtaaaatcgcgaagcctcgtcagcttcacaacacccattgg
ggcttggtctgtcctgcagaaactcctgaaggtcaagcttgtggtctggtcaagaacctg
gctctcatgtgttatatcactgtcggcacacccagcgagcccatcatcgattttatgatc
cagcgcaacatggaagtgcttgaggagtttgagcctcaggtgacgcccaatgcaacgaag
gtgtttgtgaacggtgtttgggtcggtgtccaccgagatcccgcgcacttggtcaacacc
atgctctctctgcgtcggcgcaacatgatctctcacgaggtcagcttgattcgggacatt
cgtgagcgtgaattcaagatcttcacagacgctgggcgtgtgtgtcgaccacttttcgtc
gttgacaatgaccctaagagcgagaactgcggctcgctggtgctcaacaaggagcatatc
cgcaagctagagcaagataaagaactgcccgcggaccttgatcccgaagatcgcagggaa
cgttatttcggttgggatggcttggtcaagtcaggagttgtcgagtatgtcgatgccgag
gaagaagagacgattatgatcgtcatgaccccggaagacctcgaaatctccaagcagctt
caggcgggttacgctcttccggaagaagacgatcccaacaagcgtgttcgttcgatcctc
agtcaaaaggcacacacttggacgcattgcgagattcaccccagtatgattcttggtgtc
tgtgccagtatcattcccttccctgaccacaaccagtcgcctcgtaatacctaccagtct
gcgatgggtaaacaagccatgggtgtgtttttgaccaactttgaccaacgaatggagaca
atggcaaatattctctattacccgcagaaaccgttagccacaacgcggtccatggaattc
cttcgattccgtgagctaccagctgggcagaatgccatcgtcgccattgcttgctactcc
ggatacaaccaagaagattcggtcatcatgaaccagagcagcatcgatcgtggtctcttc
cgcagtctcttctaccgcacatacacggataccgagaaaatggttggtctgactgttgtc
gagcggtttgagaagcccatgcgctcggatacgatcggtatgagaaagggcacctacgat
aagctcgatgaggacggtatcattgcccctggtgtgcgtgtctccggagaggatatcatc
atcggcaagacggccccgttggcacccgaggcggaggaactcggccagcgaaccaaggca
cataccaagctggacgtgtcgacgccattaagaagcactgaaaatggcattgtggatcag
gtcctggtctctaccagcaatgatgacctcaagttcgtcaaggtgcgcatgaggacgaca
aaggttcctcagatcggagacaagtttgcctctcgtcacggacagaagggtaccattggt
atcacctaccggcaggaagatatgccgtttacgcgcgagggtgtttctcccgaccttatc
atcaacccgcatgctattccgtctcgtatgacaattgctcacttgatcgagtgtcagctc
agtaaagtgtcggcattacgtgggttcgaaggtgatgctacacctttcactgatgttact
gtcgactcaatctctcggctgcttcgggagcacggttaccagtctcgtggcttcgaggtg
atgtacaatgggcatactggacgcaagctggttgcgcaagtgttcctgggaccaacgtac
tatcagcgtctgcgccacatggtcgacgacaagatccacgcccgtgcccgtggaccgact
cagattctgacccggcagcctgtggaaggtagagcccgtgacggtggtctgcgtttcgga
gagatggaacgtgattgtatgattgcgcacggtgccagcgccttcctgaaggagcgtctg
tttgatgtctccgacccgttccgtgtccacatctgcgatgactgtggactcatgaccccg
attgcgaaactgaagaagggactcttcgagtgtcgactgtgcaacaacaagcacaggatc
tcgcaggtgcatatcccgtatgcggccaagcttctgttccaagaattggccgcgatgaat
atcgccgctcgcatgtttaccaaccgttctggcgtgtccgtgcggtaa |
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