Nostoc flagelliforme: COO91_03342
Help
Entry
COO91_03342 CDS
T05266
Name
(GenBank) rhlE, ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nfl
Nostoc flagelliforme
Pathway
nfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COO91_03342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfl03019
]
COO91_03342
Enzymes [BR:
nfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COO91_03342
Messenger RNA biogenesis [BR:
nfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
COO91_03342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HI1480
UTP25_NTPase-like
CMS1
FANCF
Motif
Other DBs
NCBI-ProteinID:
AUB37397
UniProt:
A0A2K8SPP0
LinkDB
All DBs
Position
3129010..3130353
Genome browser
AA seq
447 aa
AA seq
DB search
MSFSNLGLSNEIIRAVTERGYTEPTPIQIQAIPAVLSGSDLLAGAQTGTGKTASFTLPLL
HRLSSDKSIKGTYKGYPPIRALILTPTRELAAQVEESVREYGKYLQLNSMVMFGGVGINL
QKQRLKNRVDILVATPGRLLDHVQQGTLNLSHIEVLVLDEADRMLDMGFIHDIRRILSLL
PKKRQNLLFFATFSDKIKALAAGLLNNPTMIEVARRNVTAETIAQKIYHVDRDKKRQLLA
HLIRRDNWYQVLVFTRTKYGADRLVKQLGEDRIQALAIHGNKSQPVRTNALAKFKNGSLQ
VLVATDIAARGLDISELPHVVNFDLPNVPEDYVHRIGRTGRAGASGEAVSLVSVDEYPLL
KDIEKLIEQRLPREVVAGFALNPDINPEPIPNGRQHRAKTERDKRPARAANPLPQTSAKR
KAAPPATNGDKPGARSSASRRSAKRDR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttctaatctcggcttgtccaatgaaattatccgtgcggttaccgaacgcggg
tacactgaacccacgccaattcagatacaggcgattcctgccgtcttgtcgggtagcgat
ttgctagctggggcacaaactggtactggaaagaccgctagttttaccctaccgcttctg
catcggttgtcgtctgacaagagcatcaaaggtacatataagggatacccgccgatccgg
gcgctaattcttacaccaactcgtgaactcgccgcacaggtagaagaaagcgtgcgcgag
tacggtaagtacttgcagttaaactcgatggtgatgttcggcggagtcggtattaatctg
caaaaacagcgtttgaagaaccgagtggatattctagtcgctactccagggcgactgtta
gaccatgtacagcagggcacgctgaacctgtcgcatattgaggttttggtgctagatgaa
gcagatcggatgctggacatgggctttattcatgatatccgtcgcatcctctcactattg
cccaaaaagcgacaaaatttgctattcttcgctactttctcggacaaaattaaggctctc
gccgccgggctgctgaataacccgacgatgattgaggtagcacgccgcaacgttaccgcc
gagacgatcgcacaaaaaatttaccacgtagaccgtgacaagaaacgccaattacttgct
cacctgattcgccgagataattggtatcaagtgctagtgttcacccgcactaagtacggt
gctgaccgtttggttaagcagttgggcgaagaccgcattcaagcactggcaatccacggg
aataaaagccagccggtgcgtactaatgctctggcaaagttcaaaaatggcagcttacag
gtattggtggcgacagacattgctgctagaggtcttgatatcagcgaactgcctcatgta
gttaacttcgatctacccaatgtaccggaggattatgttcatcgcattgggcgcactggc
cgcgctggcgcgtcaggtgaagctgtatcgctggtgtccgttgatgaataccctctattg
aaagatattgaaaaactgattgagcagcgcttgccaagggaagtggtagctggttttgcg
ctcaaccccgatattaaccccgaaccaatcccaaatggacggcaacacagagcaaaaacc
gaacgtgataagcgtccggctcgtgctgctaacccgttaccacagacatcagctaaacgt
aaggcagcgccaccggctacaaatggcgataagcctggtgctcgttcgtcggcatcgcgc
cgttctgctaaacgcgatcgctaa
DBGET
integrated database retrieval system
