Nostoc flagelliforme: COO91_03559
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Entry
COO91_03559 CDS
T05266
Name
(GenBank) rnb, exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nfl
Nostoc flagelliforme
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfl03016
]
COO91_03559
Enzymes [BR:
nfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
COO91_03559
Transfer RNA biogenesis [BR:
nfl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
COO91_03559
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AUB37613
UniProt:
A0A2K8SQN2
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Position
3315190..3317250
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AA seq
686 aa
AA seq
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MEKGTLVEFRVQGDRRLGIVERPDGKTRWFVVDERGQSHSLAPRQITYTVTGQTYKPSEI
ASFLEQIKPYLDPSSLEVAWELLVEDGETVTPDQMANLLFSESDAPPCYAAHCLLSDDKL
YFKQKGDAYEPRTAAQVAERKHQMEVEALKAKGQQEFLTRVEQALKGETVEWQRHDRQRL
EGLEKYAALLADTVRTGVNYDSLARAYPPSAPVLETMTMLGRPTTPQGAFELLVDLGCWS
PYENLFLRRSSIPIQFPNKVLEVAQQRLDFPPIDSDTNRLDLTHLKVYTIDDETTTEIDD
GLSWEVLPDGRERLWVHIADPTRWLVPEDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLIQGRVCCALSFGIILDTSGGVEDYSIHTSLIKPTYRLTYEDVDEMLQLRVQAEPEIA
AIATWAQKRKAWRYAQGAISITMPEAMIKVKGDEINIDILDDSPSRQVVAEMMIVAGEVA
ARYGKAHNIPLPFRGQPQPELPAEEELLLLPAGFVRACAMRRCMPKSEMSITPLRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSADQLKEVMMTVTSITQEVTMVERQT
NRYYALEYLRRHPEETWEVTVLMWLREDSNLALILLEDLGLQLPMVFKRSVKLGEQILVK
VSHADPQKDMIQFQEIVYQEAQTAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttagggttcaaggcgatcgccgtctgggcatcgta
gaacgcccagacggtaaaacccgctggtttgtggtagacgaacgtggtcaatcccacagc
ctcgcgcctagacaaataacttatacagttaccgggcagacctacaagccttctgagatt
gccagctttttggagcagatcaagccttatttagacccatctagcttagaagtagcttgg
gaattactggttgaggatggggaaacagtcacccccgaccaaatggcgaatctgctattt
tcagaatcagacgcgcctccttgttacgccgcccattgcttgttatcagacgacaaactt
tatttcaagcaaaaaggagacgcttacgagccgcgaactgctgctcaggtggcagaacgc
aagcaccagatggaagtagaggcgctaaaagccaagggacagcaggaatttttaactcgt
gtagagcaggcgctcaaaggtgaaacagtagagtggcagcgccatgatcgccagcgctta
gaaggactcgaaaaatacgccgcgctgcttgctgacaccgtgcggacaggggtcaattat
gactccttggctcgcgcttatccaccaagcgctccagtattagaaactatgaccatgctg
ggacggcccacaacaccccaaggagcctttgagctgttagtggatttgggttgctggagt
ccttatgaaaacttgttcctgcgtcgttcttcaattccgatccaatttcctaataaggta
ttagaagtggcgcaacagcgtttggatttcccgccgattgactcagatacaaaccgcctt
gatctgactcacctgaaggtctacaccattgatgatgaaactaccacagagatcgacgat
ggtctgagttgggaagtactacccgatggccgggaacggctgtgggtgcatattgccgat
cctactcgatggttagtgccggaagatgaattagatttggaagccagaaagcggggtagt
acagtctatttacctacggggatgattcccatgttcccagaggtattagcgactgggcca
atgagtctgatccagggacgggtttgttgcgccctcagtttcgggattattttagataca
agtgggggagtagaagattacagcattcataccagcttgattaagccgacttatcgtctc
acctacgaagatgtagatgaaatgctgcaattacgggtacaggcagaaccagaaattgct
gcgatcgcaacttgggcacagaagcgcaaagcttggcgttacgctcaaggggcaattagc
atcaccatgccggaagcgatgatcaaagtcaaaggtgatgagatcaatattgatattttg
gacgattccccatcgcggcaagtagtggcagaaatgatgattgttgccggtgaagttgcg
gctcgttatggtaaagctcataacatacctttgccctttcgcggtcagcctcaaccagaa
ttacccgcagaagaagaattgctgctacttcccgccggattcgttcgggcttgcgctatg
cgtcgttgtatgcccaagagtgaaatgagcattacgcctctgcgccatgctggtttgggt
ttggatacttatacccaagcaacctctcccatccgtcgttacagtgacttgcttacccac
ttccagcttaaagcccatttgcggggtgaagttttaccattttccgcagatcaacttaaa
gaagtgatgatgactgtcactagcatcacccaagaagtgacgatggtggaacggcaaact
aatagatattatgctctagagtatttacgccgtcatccagaggaaacttgggaggtaaca
gtgttaatgtggctgcgagaagacagcaacttggctctaattttgttagaagacttgggc
ttgcaattaccaatggttttcaaacgttctgtaaagttgggcgaacagatattggtgaaa
gtcagccacgccgacccgcaaaaagatatgatccagtttcaagaaatagtttatcaagaa
gcccaaacagcagcgaattag
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