Nostoc flagelliforme: COO91_03673
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Entry
COO91_03673 CDS
T05266
Name
(GenBank) rnd, ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nfl
Nostoc flagelliforme
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfl03016
]
COO91_03673
Enzymes [BR:
nfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
COO91_03673
Transfer RNA biogenesis [BR:
nfl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
COO91_03673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF7307
HEF_HK
EAD11
DUF1811
Exonuc_VII_L
GreA_GreB_N
Motif
Other DBs
NCBI-ProteinID:
AUB37726
UniProt:
A0A2K8SQI9
LinkDB
All DBs
Position
complement(3407508..3408428)
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AA seq
306 aa
AA seq
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MPYLTSAREISAIVAEYTNAKTLWIDTEVADYKSRNPRLSLLQVLDNPKDMSGDRVYLLD
VLDQPNIIAEFIDKIMTNSAIEKVFHNASYDLKFLGNKKAKNITCTLEMVKKIPYYLLPL
PNYQLKTIATSLCSFNNIDKQEQTSDWGKRPLTEEQIEYAYLDCIYLAQIHSNLLDLQAQ
ASPDPAKEDLISLSTRYSQLEQQYKLLNSEFEHLQERMKKAMQAQDISETAYYKLTSYER
TTVKATFTELARLAQSEGINLDFPITLTQKLQKDLGQNLEQLSVDIEKTTSWRLNSKTQE
NDIEDD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccgtaccttacttccgcccgcgaaattagtgccattgtcgctgaatatactaacgct
aaaacgctgtggatagatacagaagtagctgactataaaagtcgtaatccccgactatcg
ctgcttcaggtattagataatcccaaagatatgagtggcgatcgcgtctaccttttagat
gtcctagatcagcctaatattatagctgaatttattgataaaattatgacaaattctgct
attgaaaaagtttttcacaacgccagttatgatctaaaatttctcggtaacaagaaagcc
aaaaatattacttgtactttggaaatggtaaaaaaaattccctactatcttttaccatta
cctaattaccaactcaaaaccatagctacatcactttgtagctttaacaatatcgataaa
caagaacaaacaagcgattggggaaaacgccccctgactgaagaacagatagagtatgct
tacttagattgtatttatctggctcaaatccactcaaatttattagatttacaagcccaa
gctagtcccgatcccgcaaaggaagacttaatctcactaagtaccagatactcgcaactt
gagcaacaatacaagttgttaaattcagaatttgagcatttgcaagaacgcatgaaaaaa
gccatgcaagctcaggatatatctgaaactgcctattataagctgactagttatgagcgt
actacagtcaaagctacttttacagaattggcaaggctagcacaaagtgaaggtattaat
ttagattttccaatcacactaactcagaaactccaaaaagatttagggcaaaatctagaa
caactctctgtagatattgaaaaaacaacctcttggcggctaaattccaaaactcaagaa
aatgatattgaggatgattaa
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