Nostoc flagelliforme: COO91_04305
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Entry
COO91_04305 CDS
T05266
Name
(GenBank) recJ, single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nfl
Nostoc flagelliforme
Pathway
nfl03410
Base excision repair
nfl03430
Mismatch repair
nfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COO91_04305
03430 Mismatch repair
COO91_04305
03440 Homologous recombination
COO91_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfl03400
]
COO91_04305
DNA repair and recombination proteins [BR:
nfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
COO91_04305
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COO91_04305
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
COO91_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AUB38338
UniProt:
A0A2K8SSG5
LinkDB
All DBs
Position
complement(3997324..3999699)
Genome browser
AA seq
791 aa
AA seq
DB search
MPEQQQWTIAATEQPPEWFIQAVKQHTPASTGIYAAQLLWQRGIKDHQQLAAFINYKAYQ
PASAFEFGQEMHLAIARLQQAYNIKEKIAIWGDFDADGITATSVLWDGLGQFFKQNTQLI
YYIPNRLKESHGLNNQGIDNLAKQGCKLIVTCDTGSTNIEEIIYAKQLGIDVIVTDHHTL
PAERPPVAAIINPRYLPREHQLFNLSGVAVAYKLVEALYQSLPNIAKHPLEDLLDLVAVG
LIADLVQLSGDCRYLAQMGIQRLQADFQQPVAARRRPGVGRLLELCQKSGDRPTDISFGL
GPRINAVSRIQGDASFCVELLTSRDAKRCNELAEVTELANTRRKSLQKDVQAQVAQKLTQ
LDLSTTSVIVLEDAQWPAGVLGLVAGQVAQETGRPTILLSTEGSGELGVGSGEEDSAPTP
LARGSARSVNSVDLYQLVKDQAHLLHRFGGHPFAAGLSLLVENIPLFTAAINQQLRQSLG
STTLTPTVQADLTVTVADLGKELFLELKLLEPCGMGNPVPKLLIQNCWFENSWHRNQQDW
QGKKVQYIKTEFDIRDDSSRSAFPGIWWGHYKDELPIGRCDCIAELDYNTFKKRYEIRLI
AVRPSVNSALSTRNSPLILDWRNFTTPHSPLPTPPLLLEDCPTNWDDLRAWLRRCLTISS
SQQLAIAWSKPNLQPPNQIWLTLVGIAKYLSRTNQLVTRVQLLEKIGITDQTLLVGIKAL
KYLGFTVKRQDRYLQITWHPSDNAENLAEAAVERFLAAVREEQFQREYFAEVPLSTIVAI
ASSDNYMGTNF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaacagcagtggactatagcagcaaccgaacaacccccggagtggttcatc
caggcggtgaaacagcatacacccgcatcaactggaatatatgcagcacaattgttatgg
caacggggaattaaagatcatcaacaattagcagcttttattaactacaaagcttatcaa
ccagcgagtgcgtttgagtttgggcaagaaatgcacttagcgatcgcccggttgcaacaa
gcatataacatcaaagaaaaaattgccatttggggagactttgatgctgatggtattacc
gccacatctgttctttgggatggattggggcaattttttaaacaaaatactcagttaatt
tattacattcccaatcgcctaaaagaatctcacggactcaataatcaagggattgataac
ctcgcaaaacaaggttgcaaattaattgttacttgcgatacaggcagcacaaacattgag
gaaattatctatgccaaacaactaggcatagatgtaatcgttacagaccatcacacctta
cctgccgaacgtccacccgtcgcagcaattattaatcctcgttatttgcccagagaacat
cagctgttcaatctttctggggtagcggtagcttataagttagtggaagcattatatcaa
agtctgcctaatattgcaaaacatccgttagaggatttattagatttagtagcagtagga
ttaattgccgacttagtgcagttaagtggagattgtcgctatttagcacagatgggaatt
caacgactgcaagcagattttcaacagccagtagcagcgcgtcggcgtccgggggtgggg
cgattattagaattgtgccaaaaaagtggcgatcgccccacagatatttcctttggtttg
gggccaagaattaacgccgttagccgcatccaaggcgatgctagtttttgcgttgaatta
ttaactagtcgggatgccaaacgttgtaacgaactagccgaagttacagaactcgcaaac
acccgccgcaaatctttgcaaaaagatgtgcaagcgcaagtagcacaaaaacttactcaa
ttagacttatcaaccaccagcgtcatcgtcctagaagatgcccaatggcctgcgggcgtc
ttgggcttagttgctggacaagtagcacaagaaacaggtcgcccgactattttgttaagt
acggaagggagtggggaattgggagtagggagtggggaagaagattccgcccctactccc
ttagcaaggggttccgcccgttcggtgaattctgtcgatttataccaactggtaaaagac
caagcacatttgttacatcgctttgggggacatccctttgcagcaggtttgagtttgtta
gtggagaatattcctttatttacagccgcgattaatcagcagttgcgtcaatctttaggt
agtacaaccctaacgccaaccgtgcaagcagacttgacggtaacagtagcagacttgggg
aaagagttatttttagaactgaaactgctagaaccttgtggaatgggtaatcctgttccg
aagttgttaattcaaaactgctggtttgaaaattcttggcatcgcaatcagcaggattgg
caagggaaaaaggtacagtacattaaaaccgagtttgatattcgggatgattccagcaga
agtgcttttcctggtatatggtggggacactacaaagatgaattgcccataggaaggtgt
gattgcatagcagaattagactataacaccttcaaaaaacgttatgaaattagattaatt
gccgtgcgtcccagtgttaactcagcacttagcactcggaattccccactcatcttagac
tggcgtaacttcaccactccccactccccactccccactcccccgctcttgcttgaagat
tgtcctacaaattgggatgatttacgcgcgtggttgcggcgatgtctaacgataagtagt
tcgcaacaattagcgatcgcttggtctaaacccaacctccaaccacccaatcaaatttgg
ctgactcttgtaggaattgccaaatatcttagtcgcacaaatcaactagttacccgcgtc
caacttttagagaaaatcggcatcaccgaccaaaccttacttgtaggcatcaaagcttta
aaatatttagggtttacagtcaaacgacaagaccgttatttgcaaatcacctggcatcct
agcgataatgcagaaaacttggctgaggcagcagtggaacgatttttagctgctgtcaga
gaagaacaatttcagcgagagtattttgctgaagttcctttatctactattgtggcgatc
gcaagttccgacaattatatgggtacaaacttttaa
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