Nostoc flagelliforme: COO91_05960
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Entry
COO91_05960 CDS
T05266
Name
(GenBank) sbcC, exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nfl
Nostoc flagelliforme
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfl03400
]
COO91_05960
DNA repair and recombination proteins [BR:
nfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COO91_05960
Archaeal homologous recombinant proteins
COO91_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_15
AAA_21
DUF5408
CTU2
Motif
Other DBs
NCBI-ProteinID:
AUB39964
UniProt:
A0A2K8SX05
LinkDB
All DBs
Position
complement(5530158..5533184)
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFRGLHTACISGSNGAGKSSLLEAITWAIWGESRATAEDDV
IYSGAKEVRVDFTFQSNQQKYRVIRTRIRGGTSVLEFQIEIPSGFRSLTGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILAELLKLNQYDDLEERAKESSRQF
KARAVELERSLESIKVQLQQRETTEAQRVELEAELNQLQQVQAFDNIQLQSLQVVQHQRQ
NWEQQLSFIKQQYQNLTQDCDRLQQEQSAIGSQLSDLEKILHQEAEIKAGYAQYQSLQSQ
EEAFAAKFEEYTRAGQTRQQKQQQLTKQIHEIERQLQQAQAQIEALQQQERDIQQTLTKS
GEVEAALSQLTAARHHVARLDQLQMQVTPLLQQRATLQSQLDRTHAGLVARLEQLQSTEN
QLQRQHRRQPQLQQAVMDVAIQIEELEKKRVYLQRVQEKGQERRHFIERLQAHQRDYEKL
LGELEQKLQMLQNPEALCPLCERPLDEHHWSRVVEKTQAELEDTQGQFWVVREQMAVSDR
EIQVLRQEYREISQQLAGYDGLREQRGQLAAQLEATTDVQQQLQQIAAEKQHLERSLQAG
DYAPDKQAELRQLDQYLQQVNYNEQDHALARSEVERWRWAEIKQGQIKDATKRQAQLLAR
KPELQSQIAQLKAKIQQDQIDSECAKQIAALERHITEIGYSSEQHNNLRIAVRQAQSWHL
RYQQLLSAQQQYPQLQTRLQELEDCRNVRVTERQKLGGQIESIIQQLQATANPSAQIQAL
EQQLAIRRRQLDEQIAKLGRLEQLAHQLETLQIQCDQQQQQLQSCKQEYRVYQELSQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSGNQFHVQFITQKAGRSAKSTKKNAKLIDTLDI
LIADSRGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIVDEGFGTQDAEGCD
RLIAAINAIASDFACILTVTHMPHLKEAFQARIEVNKTQEGSQLSLSI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtacaacttatcctcaaaaactttcttagttaccgtgatgcaactttagat
tttcgtggtttgcatacggcttgtatttcgggttccaatggtgcgggtaaatcttcactt
ttggaagcaatcacttgggcaatttggggtgaaagccgcgccactgctgaagatgatgtg
atctattctggtgcgaaagaagttcgagttgattttactttccaaagcaaccagcaaaaa
tatcgggtgattcgtacccgaattcggggaggtactagcgttcttgaatttcaaatagaa
ataccatctgggtttcgctcactcactggcaaaggggtaagagcaacccaagatttgatt
ttagaacacatcaagcttgattacgatacatttattaattctgcttacttacgccaaggc
cgtgcagatgagttcatgctcaaacgccccacggaacgcaaagaaattttagcggagttg
ttgaaacttaatcagtatgatgatttggaagaacgggcaaaggaatcttctcgtcagttc
aaagccagggcagtagagttagagcgttctttggaatcgattaaagttcagttgcaacaa
cgcgagacaaccgaagcgcaaagagtcgagttagaagccgaacttaaccaactgcaacag
gtacaagcttttgataatattcaattacaaagtttgcaagttgtccagcaccagcgccag
aattgggaacagcaactcagctttataaagcagcaataccaaaatcttacccaagactgc
gatcgcctccaacaagaacaatcagctattggctctcagctatcagatttagaaaaaata
ttacaccaagaagctgaaattaaagctggatacgctcaatatcaaagtctccaatctcaa
gaagaagcctttgctgccaaatttgaagaatatacccgcgctgggcagactcgccaacaa
aagcaacaacagcttaccaaacaaattcacgaaatcgaacggcaactacaacaagcccaa
gcccaaatcgaagctttgcagcaacaagagcgagatattcagcaaactctgactaaatca
ggtgaagtagaagctgctttgtcacaactaaccgcagctcgtcaccatgttgctcgtcta
gatcagctgcaaatgcaagttactcccttgttgcaacaacgagcaactttacaaagccaa
ctcgatcgcactcatgctggtttagtagcgcgactcgaacaactccaaagtactgagaac
caattgcaacgccagcaccgccgccaaccgcaactgcaacaagcggtgatggatgtggca
atccagattgaggaactggagaaaaagcgggtttatttgcaacgagtgcaggaaaaaggg
caagaaaggcggcactttatcgaacgtctgcaagctcatcaacgcgactatgaaaaactg
ctgggagaattagagcagaaattgcaaatgctccaaaatcctgaagctctttgtccatta
tgtgagcgtcctttagacgaacatcactggagccgggtagtggaaaaaacccaggctgag
ttagaggatactcaagggcagttttgggtagtgcgggaacaaatggctgtgtctgacaga
gaaattcaggtacttaggcaggaatatcgggaaatttctcaacaattggcgggctacgat
ggtttacgcgaacaacggggacagttggcagcccagttagaagctacaactgatgtgcaa
caacagttacaacaaattgctgctgaaaaacaacatttagagcgatcgctccaagctggt
gattacgctcctgataagcaagccgaactccgacagctagaccaatatttacaacaagtt
aattataatgaacaagaccacgccctcgcccggagtgaagttgagcggtggcgatgggca
gaaattaaacaagggcagattaaagatgctactaagcgacaagcgcaactattagcccga
aaaccagaattacaatcccaaattgctcaattaaaagccaaaatccaacaggatcagatt
gattctgaatgtgctaaacaaatcgcggctcttgagcgtcacattaccgaaattggctac
agttcggagcagcacaacaatttgcgtatagctgtccgccaagctcaatcttggcatttg
cggtatcaacaactgttgtcagcccagcagcaatatccgcaactccaaacgagattgcaa
gagttggaggattgcagaaacgtcagagtaaccgagcggcaaaaacttggcggacaaatt
gaaagcattatccagcaattacaagcaacagctaacccatctgcccaaattcaagctttg
gagcagcagttagcaatacgcagacggcaactcgatgagcaaattgccaagttagggcgt
ttagagcagttggcgcatcaactagaaacgctgcaaattcagtgtgatcaacagcagcag
caattacaatcttgcaagcaggaatatcgtgtttatcaggaattatcgcaagcttttggt
aaaaatggtatccaagcactgatgattgagaatgtgttaccgcaactggaagctgagaca
aatcaactactttcgcggctgagtggtaatcaatttcatgtacaatttattactcaaaaa
gctggacgcagtgctaaatcaactaagaaaaatgccaagctgatagacaccttagatatt
ttaatcgccgattctagaggaacacgagcttatgaaacttactctggtggagaagctttt
agaattaactttgccatccgtttagccctggcgaaattattagcgcaacgggcgggggcg
gctttgcaattgttgattgtagatgaaggtttcggtacacaggatgccgaaggatgcgat
cgcttgattgcagcgattaatgcgatcgcttccgattttgcctgcatcctcactgtcact
cacatgccccacctcaaagaagctttccaagccaggattgaagtgaataaaactcaggaa
ggttcgcagttgagtttgtcaatttaa
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