Nostoc flagelliforme: COO91_09224
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Entry
COO91_09224 CDS
T05266
Name
(GenBank) Superfamily II DNA or RNA helicase, SNF2 family
Organism
nfl
Nostoc flagelliforme
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AUB43066
UniProt:
A0A2K8T5T1
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Position
pNFSY03:10882..15093
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AA seq
1403 aa
AA seq
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MINLATDTIKLQTQLANIYFELHPSLQKIIQLFSVIYAAIDKNSFVSCLSKTGALDEKNK
PWGTKTLSPQIDKLLKAGLLVQSSRQGAECHPLLTEIATRHAVHTGQLEILVTAVEEKLP
IRTHWNRDSRIFSSLRQCIREIRIGIYRQDLSFINQQIEDYQKYSDSEEKIVIENIFEQI
YNNPFDADWFKTLPLGLYERGISSILFNSALKLSACEDALTLLEEECPTPGKHCSDYLHL
ILTEQLLLQGCTQEAQESLERVSNEYQNNAAIFWGWLSFLRGENEQAIKYYTDALKASKK
ATGKRQIYFNTMGGLFFILALLKDGSVQRLKEAEEYSSLMSRQGDHWLRFTYGRLNMVLQ
VQLGDITQKQFVVSGHISSVEEENSLQTLFCSLCLYWMDAESAKKRLPNLLEPLYRRSLA
SGYHWLAMETAELLSRLKPSSNYNQLAPALREDSNIQTIVDLIRPQEAWEMCLNALANLQ
SRPQTSLKSESELRLAWFITFYPSRCVLQPREQKVNVKGEWSKGRPIALKRLNSALSEFD
YITPQDMRVCSCIEVYSEGYYGKVDYTFGEKAISALIGHPLVFWEDTPTIRVEIVKGEPE
LLVKKGKLDRLTLEFSPKLPESQNILHIKETPTRIKVIEITAEHRRIAEIIGKDNKLNVP
AFAEKQVLAAINAVSGIVTVHSDIGGGLEGAEEVPAQTLPHIHLLPANVGLKISLLSRPF
AQGGPYYRPGTGGETVIAEIDGKRLQTRRNLPQEKQLAKAAIKACPTLTRTEEQDGEWVI
ADPEDCLELLLELQALGSNVVIEWPQGEKLRVSHNADLKDFNLSIQRQQDWFAATGELKL
NNDLVLDMQQLLELLEKTPSRFIPLGDGQFLALTQAFRKRLDELRMFSEKHSSCIRFHPL
ATLGLEDFVDEVGKVKADKHWKAHRERLKEVQNLQPELPSTLLAELRDYQMEGFCWLARL
AHWGVGACLADQMGLGKTLQALAVILRNAHEGPTLIIAPTSVCMNWVSEAQKFAPTLNII
QFSGANRQKLLDGLQPLDMLICSYGLLQQEEVAQMLSGVQWQTIVLDEAQAIKNMTTKRS
QAAMNLKSNFKLLTTGTPIENHLGELWNLFRFINPGLLGSFESFNQRFATPIEKYQDKLA
RNKLKKLIQPFLLRRTKNQVLEELPSRTEILLHVELSREEKAFYEALRRQAISKLTETDA
EAGKKHLQVLAEIMKLRRACCNPSLVMPDTELRSSKLQLFGEVLGELLENRHKALVFSQF
VDHLHIIRDYLEQQGISYQYLDGSTSVSERKKRVDAFQAGSGDVFLISLKAGGTGLNLTA
ADYVIHTDPWWNPAVEDQASDRAHRIGQQRPVTIYRLVAKDTIEEKIVQLHQHKRDLADS
LLSGADISGKISTEVLLQLISES
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttggctactgataccataaaactgcaaacacaactcgccaatatatacttc
gagttacatccttccttacaaaaaattattcagttattttcggtaatttatgcagcgata
gacaaaaattccttcgtaagttgtcttagtaaaacgggtgctttagatgaaaagaataaa
ccttggggtactaaaacccttagtccccaaattgataaattgttaaaagcaggcttgtta
gtacagtcaagcagacaaggtgctgaatgtcatccgttactaacagaaattgctactcgt
catgctgtacatactggacagcttgaaatccttgtcacagcagtagaggagaagctacca
atacgtactcactggaacagagattctcggattttctccagtctgcgccagtgtatcaga
gaaatccgcattggtatttatcgtcaagaccttagttttattaatcagcaaatagaagat
taccagaagtacagtgatagcgaagaaaaaatagtaatagaaaatatttttgagcagata
tacaataatccatttgatgcagattggtttaagaccctaccacttggattatatgaacgt
ggcatatcaagtatcctcttcaattcagccttaaaattatctgcttgtgaagatgcgttg
acgctgctagaagaagaatgtcctacacctggaaaacattgctcagattatctacatctg
attttgacagaacaactgttgttacagggttgtacccaagaagcacaagaaagtcttgag
cgtgtatcaaatgaatatcaaaataacgctgctatcttttggggttggttaagttttctg
cgaggtgaaaatgaacaagccataaaatattatacagatgccctgaaagcgagcaaaaag
gctacaggcaaacggcaaatatatttcaatacaatggggggcttattttttatcctcgca
ctgttaaaagatggttcagtgcaacgcctcaaagaagcagaggagtatagcagtttgatg
tcccgtcaaggggatcattggctcaggttcacttatggcagattgaacatggtactgcaa
gttcagcttggcgatattacccaaaaacaatttgtagtcagtggtcatatttcttccgtg
gaagaagaaaatagcttacaaacattgttttgttcactatgcctttactggatggatgca
gaaagtgctaaaaaacgcttacctaatttactagaaccactatatcggcgatcgctcgcc
tctggttatcactggttggcaatggaaaccgcagaacttctatcccggctaaaacctagc
agtaactataatcaacttgctcccgcactgcgagaagatagcaatattcaaaccatcgta
gacttaattcgacctcaagaagcttgggaaatgtgccttaatgccctggcaaatcttcaa
tcaagaccacaaacatccctaaaatcagaatcggaactgcgtttagcatggttcattacc
ttctatcccagcagatgtgtcttacaaccacgagaacaaaaagtaaatgtcaaaggagaa
tggagtaaaggtcgccccatagccctcaagcgtttgaacagtgcattatctgagtttgat
tacatcacaccccaagatatgcgggtatgtagttgtattgaagtatatagtgaaggctat
tacgggaaagttgattatacctttggtgaaaaagccatctctgctttaattggacacccg
ttagttttttgggaagatacaccgactattcgtgtagaaattgtcaagggagaaccggaa
ctactggttaagaaagggaaacttgatcgtctcaccttggaattttctcccaaattacca
gaatcacaaaatattctgcatatcaaagaaaccccaacccgcatcaaagtcattgaaatt
actgccgaacacagacgcattgcggagattattggtaaagataataaattaaatgtacct
gccttcgccgagaagcaagttttggcagcgatcaatgccgtctctggcatcgttacggta
cattctgatattggcggcggactcgaaggtgcagaagaagtacccgcccagactctaccc
catattcatcttttacctgccaatgtcggcttgaaaatcagccttttgtcgcgccctttt
gcccaaggtggcccctactaccgtcctggtacaggtggtgaaacagtaattgccgagatt
gacgggaaacgtctgcaaaccagacgaaatctgccccaagagaaacaacttgctaaagcc
gccatcaaagcctgtcccaccttgacgcgaactgaagaacaagatggtgaatgggttata
gctgacccagaagactgtttagaactgctgctagaactgcaagcactgggaagtaacgta
gtcatagaatggccacaaggagaaaaactgcgtgttagccacaacgcagacttgaaagac
tttaatttatcaattcaacgtcagcaggactggtttgcagccactggggaattaaaattg
aataacgacctagtgctagatatgcagcaactactagaactactggagaagacccccagc
cgatttattccccttggtgatggtcaatttctggctttaactcaagcttttcggaaacgc
ctcgacgaattgcggatgttttcggaaaaacatagttcatgtattcgctttcaccccttg
gcaacattagggttagaagattttgtcgatgaggtaggtaaggtaaaagcagataaacat
tggaaggcacatagagagcgacttaaggaggtgcagaacctccagccagaactgccatct
acacttcttgcagaactacgggactaccaaatggagggtttttgttggctggcgcgtctg
gcacattggggtgtgggtgcttgtttagcagaccaaatgggactcggtaagaccttgcaa
gcattggcggtcattctcagaaacgcccatgaggggccaaccctaattattgcgccgact
tccgtgtgcatgaattgggtgagtgaagcgcagaagtttgccccaactctgaatattatt
caattttctggtgctaaccgtcaaaaattattggatgggttacaaccattggatatgttg
atatgtagttatggtttattacagcaggaagaagtagcgcaaatgctttctggtgtacag
tggcaaacgattgtcctggatgaagcccaggcgattaaaaatatgaccactaaacgttct
caggcagccatgaacctaaaatctaattttaagttgctgactactgggactccgattgag
aatcacctgggtgagttatggaatttattccgttttattaatcctgggttgttgggttct
tttgaaagctttaatcaacgctttgctacccccattgaaaaatatcaggataaacttgca
cgtaataaactcaaaaaactgattcaaccatttttattgcgacggacaaaaaatcaagta
ttagaagagttgccatctcgtaccgaaattctccttcatgtagagttaagtcgagaggaa
aaggcattctatgaagcgttgcgccgtcaggccatatctaaacttaccgaaactgatgcc
gaagcaggaaagaaacatttgcaagttttggctgagattatgaaactgcgtcgcgcttgc
tgtaatcctagcctcgttatgcctgacactgaattacgcagttccaagttacaacttttt
ggtgaggtgctgggtgaacttctggaaaatcgtcataaggcgttggtgtttagtcagttt
gttgaccatttgcacattattagagattatctggagcagcaaggtattagttatcaatat
ttagatggcagtacttcagtctcagagcggaaaaaacgggtggatgctttccaagctggt
tcaggggatgtatttctgattagtctcaaggcagggggcacaggactgaatctgactgct
gctgattatgtgattcatacagatccttggtggaatcccgcagtggaagaccaagcctca
gaccgcgcccatcgcattgggcaacaacgccctgttaccatttatcgtctagtagcaaag
gatactatagaagaaaagattgtgcaattgcatcagcacaagcgagacttagcagacagc
ctattgtcaggtgctgatattagtggtaaaatctcaacggaagtcttgttacagctgatt
agcgaaagttaa
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