Nostoc flagelliforme: COO91_09604
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Entry
COO91_09604 CDS
T05266
Name
(GenBank) recD, exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nfl
Nostoc flagelliforme
Pathway
nfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COO91_09604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfl03400
]
COO91_09604
Enzymes [BR:
nfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
COO91_09604
DNA repair and recombination proteins [BR:
nfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COO91_09604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
NAT10_TcmA_helicase
UvrD-helicase
PIF1
NPHP3_N
nSTAND3
HHH_2
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AUB43427
UniProt:
A0A2K8T6V3
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All DBs
Position
pNFSY05:86639..88936
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AA seq
765 aa
AA seq
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MSLLQVEKFPSLTLSEIQQYLESGLFRGIGKKTAQTLVKHFGTSTLSVLDNAPEKLNSIP
ELSTYRITAITSSWSLSKTNPNFGVIIQLLAVGTSLKLALKICDHYGHKTSSVLQNNPYR
LADEVDGIGFKTADQLAISLGISLDSETRYASSLIHVLKSAMQEGNCFLPSSQLLAAAMD
ALNHREHTPDIQSLSTILAKLIDKGTLISGDGESIYLKAAYRAELSVALKIQSHLNQPTR
PKEHLEHWLSNLQATDYRQLSRLSDEQLSALVMAAKHPISIITGGPGRGKTHILKTLVEW
LTSIRATIALTAPTGKAANRMKDATGMEASTIHRLLQWQGVGQAFLYNEENLLALDWLIV
DEFSMVDIFLFNSLLKAMPAKTQILLVGDSDQLPSVGAGMVLRDLLHSDLIPTTRLQTIY
RQRHESLIIYAATDVNLGTVPTLHKFHQPQEWMDVSDCAMLETPSPQATANTIVSLALAM
SKENVDLNQQLMVLAPQKSGLAGVNNLNKLLAPIFNPKLENQAEVVSGSVIYRVGDRVIQ
LKNRYETVPPVMNGEMGRIIAVDPLKELLTIDWEGGARVDYYRSDFEQIMHSFCITCHKS
QGSEFPYVIFPLLTSNSRMLTRQLLYTTMTRAMGTFIAVGQLLALNIAVATDKPAKRFTG
LTNLLISPPDELANIWRRLGNATKSPTTASTLTIASRLQQRQLTATQGQMTTIGSLALQM
YESKFGYRPSKQPELVGKFRFNTYHYETSSVELIDSAIDAVLHNQ
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccttcaagtcgagaaatttccatcgttaaccttgtccgaaattcagcagtat
ttagagagtgggctgtttcgtggcattggtaagaaaactgctcaaactcttgtcaaacac
tttggaacttcaaccttatcagtgttagacaacgctccagaaaaactgaactcaattcct
gaacttagtacttatcgaattaccgcaattacttcatcttggtcattaagtaaaactaat
cctaactttggggttattattcaacttctggctgtaggaacttcattaaaattagcctta
aaaatttgtgaccattacggacacaaaacctcttctgtactgcaaaacaatccttatcgc
ctagcggatgaagtcgatggtattggttttaaaactgctgatcagctagcgatatcttta
ggaatctcacttgatagtgagactcgttatgcttcatctctaatccatgttttgaaatcg
gcaatgcaagaaggcaattgttttctcccatcatcgcaattgcttgccgccgctatggat
gcgctcaaccatagggagcatacacctgatattcaatctttaagtactattcttgctaag
ttaatagataagggaactttaatttctggtgatggagagagcatttacctgaaagctgct
taccgtgctgaactttctgtggctttaaaaatccaatctcacctgaatcaaccgactcgt
ccgaaagaacatcttgaacactggttaagcaatcttcaagcaactgactatcgccaactc
tcacgcttgagcgatgaacaacttagtgctttggtcatggcagctaaacatccaatcagc
attattactggtggccctggtcgcggcaaaactcatattctgaaaactttagtggaatgg
ttgacttcaattagggcaactattgctcttaccgcccccactggaaaagctgctaaccga
atgaaagatgccacaggcatggaagcaagtaccattcaccgtctacttcagtggcaggga
gttgggcaagctttcctttataacgaagagaatctgcttgctctcgactggctgattgtt
gatgaattttcaatggtagatatattcctgtttaattctctactcaaagcaatgccagcc
aaaacccaaattttgttagtaggagactctgaccaattacccagtgtcggagccggaatg
gtgctacgagatttgcttcattcggatcttataccaacaacaagattgcaaaccatttat
cggcagcgacacgagagcttaattatttatgcagctaccgacgtaaatttgggtacagtg
ccgacattgcacaagtttcatcagccccaagagtggatggatgtaagcgactgcgccatg
ctcgaaactccttcaccacaagcaaccgctaacactattgtctctttagccctagccatg
agcaaagaaaatgtggatttaaatcaacaactcatggtattagcaccccaaaaatcggga
ctagcaggcgtgaacaaccttaataagcttcttgcccctattttcaatccaaaacttgag
aatcaggcagaagttgtttctggctctgtcatctaccgagttggcgatcgcgttatccaa
ctgaaaaaccgttatgaaactgtcccaccagtaatgaacggggagatgggcagaattatt
gctgtagaccctcttaaagaactgctaacaattgattgggaaggcggcgcgcgagttgac
tattacaggagtgactttgagcaaatcatgcattccttttgtattacttgccataagagc
cagggtagtgaatttccttatgtgatttttccattactcacctctaactcccgaatgcta
acccgccaactgctttataccaccatgacccgtgcaatgggtacatttattgctgttggt
caacttcttgcattaaatattgctgtcgccacagataagcccgctaaacgctttactggg
cttaccaatttactcatttcaccccctgatgaattagcaaatatttggcgcagattaggt
aacgccaccaaatctccaacaacagcatctactctaaccatcgcttctagactccaacaa
cgccaattgactgcaacacaaggacagatgactactatcggtagtcttgcactacaaatg
tacgagtccaaatttggttatcgtccttcaaagcaacctgaacttgtcggaaagtttcgc
tttaacacttatcattatgaaacttcttcagtcgagttaattgattcggcaattgatgca
gttctccataaccaataa
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