Candidatus Nitrosocosmicus franklandianus: NFRAN_0427
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Entry
NFRAN_0427 CDS
T05935
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfn03000
]
NFRAN_0427
Transcription factors [BR:
nfn03000
]
Prokaryotic type
Helix-turn-helix
Other families
NFRAN_0427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
PLDc_2
Scm3
EF_assoc_2
Motif
Other DBs
NCBI-ProteinID:
VFJ12748
UniProt:
A0A484I6E0
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All DBs
Position
NFRAN:394468..395271
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AA seq
267 aa
AA seq
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MSKENFRGNEMLGGLEELGLSKYEASAYLGLLGKGMVSATELAFCSDLPRTKIYFILKKL
EKKKLVFINNQKPLTFRALPPKDSFSNILKKYEKKIKDMRDIIDSLQQINDEGLEKKGLE
ERRYLILNQMYTDKKIKELIKSSREKINIALNSWGNILLRSVKDEIFQAVIRGVKIRILF
DNLSNADSIILPNAVDKKRANISTNLFIFDNDVAILINNDGTKSAYFDSHEIFKTVLTNH
FKDIWDSDNNQSKIKSTTTFDTINVSR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaaaactttaggggcaatgaaatgttgggtggtctagaagaactaggatta
tcaaaatacgaggcatcagcttaccttggattattaggtaagggcatggtttcagcaact
gagctcgcattttgttcagatttgcctagaaccaaaatttattttatattaaagaaattg
gaaaagaaaaagttggttttcatcaataatcaaaaacctttgacctttagggctcttccc
cctaaggattcatttagtaatattttaaaaaaatatgaaaaaaaaattaaggacatgaga
gacatcatagattctctacagcaaataaatgatgaaggattagagaaaaaaggccttgaa
gaacgaagatatttgatcctcaatcaaatgtacacagacaagaaaattaaagagctcata
aagtcatcccgcgagaagatcaatattgcacttaattcatggggaaatattcttttaaga
tctgttaaagatgaaatattccaagcagtaattcgaggagtcaaaataagaatacttttt
gataatctatcgaatgcagattcaattatcttaccaaatgcagttgataagaaaagagcc
aatattagtacgaacttatttatctttgacaacgatgttgcgatactaataaacaatgat
ggaactaaatcggcttatttcgattcgcatgagatctttaaaacagttttaaccaaccat
tttaaagatatatgggattcagataacaatcaatcaaaaatcaagagcactactacgttc
gatacaattaatgtcagtcgttaa
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