Candidatus Nitrosocosmicus franklandus: NFRAN_0635
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Entry
NFRAN_0635 CDS
T05935
Symbol
gabD
Name
(GenBank) putative succinate-semialdehyde dehydrogenase [NADP(+)]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
nfn
Candidatus Nitrosocosmicus franklandus
Pathway
nfn00250
Alanine, aspartate and glutamate metabolism
nfn00310
Lysine degradation
nfn00350
Tyrosine metabolism
nfn00650
Butanoate metabolism
nfn00760
Nicotinate and nicotinamide metabolism
nfn01100
Metabolic pathways
nfn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NFRAN_0635 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NFRAN_0635 (gabD)
00310 Lysine degradation
NFRAN_0635 (gabD)
00350 Tyrosine metabolism
NFRAN_0635 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NFRAN_0635 (gabD)
Enzymes [BR:
nfn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NFRAN_0635 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NFRAN_0635 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NFRAN_0635 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
VFJ12957
UniProt:
A0A484I9Q0
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All DBs
Position
NFRAN:complement(587294..588799)
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AA seq
501 aa
AA seq
DB search
MSSSSVSSSRIKNNHDGNYNPSKKIRTVNPYTEEVINEYSVITREEVFDVARKSKKAFKE
WRKDYGRRTGYLYAFANELKKERDELAKVATMEMGKTIKEARSEIDKCAWAVEYFADNGG
VFLHDEVINTDARKSIVTFEPLGVIASLMPWNFPYWQALRFAAPSLIAGNTIILKPSSVT
MQCGLEIERIFEKIGLPDFVFKTVVASGAEAGYLIDSEDVSAVTFTGSVPVGAKVAQHAT
SRLKKIVLELGGSDPFIVCEDADIDKASSGAVKGRFINCGQSCIASKRFIVVKNIANQFL
EKFIEKTERLKIGNPLSEETDIGPLVNQAAVENIDEMVKRAIKEGAELVTGGQRLGNKGQ
KVGEDGGNGSSLNKGYFYKPTILKNVTPKMEVAREETFGPVAPVIVVEDEQAAIEIANDT
QFGLGASVWTQNLNKAEKYSKLLQAGIVTVNNVVISDPRVPFGGIKNSGFGRELSKHGMF
EFVNIKSIRFYDQLVHQHYVE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcttctagtgtttcttcaagtagaataaaaaataatcatgatggtaattataat
ccatcaaaaaaaataaggacagttaatccctatactgaagaggtaatcaatgaatacagt
gtcataaccagggaagaggtttttgatgtcgcaaggaaatctaagaaagcctttaaagaa
tggagaaaagactatgggagaagaaccggatatctatacgcttttgcaaatgagctcaaa
aaggagcgagatgaacttgcaaaggtagccaccatggaaatggggaaaaccattaaagag
gccaggtccgagatagataaatgtgcttgggctgtagagtattttgccgataacggtggg
gtctttctacatgacgaagttattaatacagatgcaagaaaatcaatagttacattcgaa
ccgttgggagtaattgcaagcttaatgccttggaattttccatactggcaggctttgaga
tttgctgccccgtcattgatagcaggcaataccattatcttaaagccatcaagcgttact
atgcagtgtggattggaaatagaaagaatatttgagaaaattggtttaccagattttgta
ttcaaaacagtcgttgccagcggagccgaggcaggatatttgatcgattctgaggatgta
agtgctgttacttttactgggagcgtacctgtaggagctaaagtggctcagcatgcgacg
tcaagattgaagaagattgtattagagttaggaggtagtgacccctttatagtatgcgaa
gatgccgatattgataaggcatcaagtggggcagttaaaggtaggtttattaattgtggt
caaagttgtatcgcttctaagcgatttatagttgttaaaaacattgctaatcaatttttg
gaaaaattcattgaaaagacagagagacttaaaataggtaaccctttgtctgaggaaacc
gatataggtccattggttaatcaagccgctgttgaaaatattgacgaaatggtaaaaaga
gcaattaaagaaggcgcggagctggttactggcggtcagagactcggcaataagggacaa
aaagttggagaggatggtggtaatggctctagcttgaacaaaggctacttttacaaacct
actatactcaaaaacgttactcctaaaatggaagtggcaagagaagagacttttggtccg
gttgcccctgtaatagttgttgaggatgagcaagcggcaattgaaattgcaaacgatacg
caatttggtttaggtgcaagtgtgtggactcaaaatctgaacaaggcagaaaagtattca
aagttacttcaagcaggaatcgtaactgtcaataatgttgtgatatcagatcctagagtt
ccatttggtgggatcaaaaatagtggatttgggcgtgaactatccaagcacggcatgttt
gaattcgtcaatatcaaatcaataagattttatgatcaattggttcatcagcactatgta
gagtag
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