Candidatus Nitrosocosmicus franklandianus: NFRAN_0869
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Entry
NFRAN_0869 CDS
T05935
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfn03016
]
NFRAN_0869
Enzymes [BR:
nfn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NFRAN_0869
Transfer RNA biogenesis [BR:
nfn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NFRAN_0869
Prokaryotic type
NFRAN_0869
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
YurS_helical
Motif
Other DBs
NCBI-ProteinID:
VFJ13191
UniProt:
A0A484I7N6
LinkDB
All DBs
Position
NFRAN:797006..798298
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AA seq
430 aa
AA seq
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MKILSPEIDKLAGISCYATSTIGVDGQIKKNYTDFFVQEILKDDFLRQLSSSQQSNFSFP
IYKIEKEGIDSIHAVMLLRKKTGLNLKIIGMKDAKATTIQYASSIRSPNSRKLTEGIKIG
PVMLSLVGYSKKPLEKNNLIGNFFRIRITNTKKPYSNDIMKFISEIDKIGNYYGLQRFGS
ERLVTHLVGKAILNREFDKAVKILMTYTTKYDSKFSIEIREKLNDVRNNPSIVKEIPKGM
DIEKNLALEILNGKNSIAALRSIPITIRRLFVQAFQSFLFNKTLSKAIENDFSLTKPEIN
DLCFEVYKNNLEFGKIRKYNNKNNSKKGIIMLPIIRLPGYSFQPGNNRFDKILKDYMSLE
NMTAKDFFIKEMQELSESGGFRQASFYCKDFGYRIEDNSIIVEFSAPKGSYATILLRELI
KPVNPILAGF
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctatcaccagaaattgataaacttgctggaatcagctgctatgcaacttcg
acaatcggagtcgatggacaaataaagaaaaactatacagatttttttgtccaagaaatt
ctaaaggatgactttttgaggcaactaagttcatcacaacaaagtaatttttccttccca
atatacaagatagaaaaagaaggaattgactcaattcatgctgtaatgttactgagaaaa
aaaactggtctaaatctcaaaataattggtatgaaagatgcaaaagctaccactattcag
tacgccagtagcatccgcagtcctaattcaagaaaattgacagaaggaattaagattggt
ccagtaatgctcagtttggttggatattctaaaaaaccattagagaagaataatctaata
ggaaacttttttagaataagaataacaaataccaaaaaaccttattcaaacgatatcatg
aaattcatttcagaaattgataagataggtaactattatgggttacaaagatttggaagt
gagagattggtaacgcatttggtaggaaaggcgattttaaatagggaatttgataaggcg
gtgaagattctaatgacttatactaccaaatatgattctaaatttagtatagaaattaga
gaaaaattgaatgatgtaagaaataatccgtctatagtgaaagaaattcctaaaggtatg
gatatagaaaaaaatttagctcttgaaatactaaatggaaagaactctattgcagccctc
cgatcaattcccataacaataagaaggttatttgttcaagcatttcaatcgtttctgttt
aataagacccttagtaaagcgatagaaaacgacttttcacttaccaaacccgagataaat
gatctttgttttgaagtgtataagaataatctagaatttggtaaaatacgcaaatacaac
aataaaaacaattccaaaaaaggtattatcatgttaccaattattcgattacccggatat
tcatttcagccaggaaataaccgatttgacaagatactaaaagattacatgtctctagaa
aatatgacagccaaggatttttttataaaggaaatgcaagaactaagtgaatctggaggg
tttcgtcaagcaagtttttactgcaaggattttggatacagaattgaggataattctata
attgtggaattctctgcgcccaaaggatcttatgccaccatccttctaagagaactaatc
aagccggtgaaccccatattggcaggattttag
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