Candidatus Nitrosocosmicus franklandianus: NFRAN_0886
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Entry
NFRAN_0886 CDS
T05935
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03030
DNA replication
nfn03410
Base excision repair
nfn03420
Nucleotide excision repair
nfn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFRAN_0886 (pcn)
03410 Base excision repair
NFRAN_0886 (pcn)
03420 Nucleotide excision repair
NFRAN_0886 (pcn)
03430 Mismatch repair
NFRAN_0886 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfn03032
]
NFRAN_0886 (pcn)
03400 DNA repair and recombination proteins [BR:
nfn03400
]
NFRAN_0886 (pcn)
DNA replication proteins [BR:
nfn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NFRAN_0886 (pcn)
DNA repair and recombination proteins [BR:
nfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NFRAN_0886 (pcn)
MMR (mismatch excision repair)
Other MMR factors
NFRAN_0886 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
NFRAN_0886 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad9
Motif
Other DBs
NCBI-ProteinID:
VFJ13208
UniProt:
A0A484I680
LinkDB
All DBs
Position
NFRAN:complement(812157..812909)
Genome browser
AA seq
250 aa
AA seq
DB search
MMFVAKTKSPEGWKIINSAISTLVDEATFEATSEGISFRGMDPSHVALIDIFWPNTAFDS
YKCDSELKFGVRISEFSKLIKRTDKKDELEISISDQDVLRIKTSGSYKREYKMRLIESSS
GSTPLPKLSFNSKLVISLPSFDKILSDIEVVSEYVEIESFPEKVEFVGKSDTGEAIVIME
PNSEGLEEIDVKEESKATYSLDYLLKIVKSIGSVGVAAAIEYSSKMPIRLEFRIANIGRI
HFYLAPRVQD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgtagccaagacaaaatctccggagggatggaaaataattaattctgctatc
tctacactagtagatgaggcaacatttgaagcaacttctgaagggatatcttttagagga
atggatccgtctcatgttgcactaattgatattttttggcccaataccgcgtttgatagt
tataaatgtgattcggaactaaagtttggggtccgcatatctgaattttcaaaattgatc
aaaagaactgacaagaaagatgaactagagatctctattagtgaccaagatgtattgagg
ataaaaacaagtggtagttacaagagagaatacaaaatgcgacttattgaaagttcttcg
gggtctaccccattacccaaattgtcgtttaattcaaagctagtaatatcgttgccgtca
tttgataagatattatctgatattgaagttgtatccgaatacgtggaaatcgagtctttt
cctgaaaaagtagaatttgtaggaaaaagtgacactggtgaagcgatcgtaattatggaa
ccaaatagcgaaggactagaggaaatagatgttaaagaagaatccaaagctacctatagc
ctcgattatttgcttaaaatagtaaaatcgattggttctgttggcgtcgctgctgccata
gaatattctagtaaaatgccaattagacttgaattccgtatagccaatataggtcgtatt
cacttttatcttgcacctcgagttcaggattag
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