Candidatus Nitrosocosmicus franklandianus: NFRAN_0934
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Entry
NFRAN_0934 CDS
T05935
Name
(GenBank) putative DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfn03400
]
NFRAN_0934
DNA repair and recombination proteins [BR:
nfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NFRAN_0934
Archaeal homologous recombinant proteins
NFRAN_0934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
ABC_tran
AAA_27
zf-C3HC4_3
DUF1664
Motif
Other DBs
NCBI-ProteinID:
VFJ13256
UniProt:
A0A484I831
LinkDB
All DBs
Position
NFRAN:complement(845158..847371)
Genome browser
AA seq
737 aa
AA seq
DB search
MPIVVPNLRKTRTSELIKKLILNNFLSHSNTSLDFHPGITVFVGHNGSGKSSIIDSITFA
LFDEHTRKSNKNLITRGLEGISTNESGAHVIMNFSIGSSDYRVQRQIDVQGRLIAAKLEQ
VLRFNGNLSKEHRSGNGINSNMSYRPIISGERKQLGESVIREIESLMGINYSKLQIAGII
QQGEISKIIDSQPKEFKELLNNMIGLDRLDKSYQLMHGVIEEFRKILREKTSGYDDNQIN
VLLTRIKNNEAKLKESKKRLKEVLVQVSQKTETLIELEQQIDILEPKVAKLSEIKSLEST
LLRYFKERSNLIKKEIDNSTRMIRDIRKSLEILKDKERIFITIQMIAAEKEELNNRINMV
AEEIGKLEGFSECAQKIQIVDGKCPICNSKIVSINHMFDISHITKQLQLKLNEKKSLLSE
LTNLNREEYSLKKREKEIIEADRTLLNYDYSPQLDIERMEANLSKLNAEYLETSRLSVEG
LDGIDLAGYKLDKYSSNLIDQINHLRSSVSDVDLETFQQKKSLRNALSREMINVHNQKAV
IEKTILDIEKENSDISKIISELQSVSTFLSDLEKIRSTVFNRDGLVSSSLRTRALSLISE
KASEYIQIFNVGLSRITLVEKPREIKVICYGKRGEIDTVSLSGGEKVAVSLAIRMGIAFL
MGASKIDFIILDEPTTNLDEERRRTFVKIISEVFNKGTGPLNQLIIITHDEEIFENSEIE
QVYKFQMTERGSLVKAI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgccaatagtagtacccaatctaagaaaaacgaggacgagtgagttgataaaaaaactc
atcctaaacaatttcctatctcattctaatacgtctttagattttcatcctggtatcacc
gtgtttgttggacataatggttctggaaaatccagtataattgattcaataacgttcgct
ctttttgatgaacatactcgcaaatctaacaagaatctcataactcggggattagagggt
attagcacaaatgagagtggagctcatgtaataatgaatttctctatcggttcttctgac
tatcgtgtgcaaagacagatagatgtacaaggccgactcatcgccgctaaattagaacag
gtattacgatttaatggcaacttatcaaaagaacatcgatctggtaacggtattaattcc
aatatgtcatataggccgattatttcaggagagagaaaacaattaggcgaatcggtgata
cgtgaaatagaatcacttatgggaataaactattctaaattgcaaattgctggtatcatc
cagcaaggagagattagcaaaataatagattctcagcctaaagagtttaaagaattatta
aataacatgataggtctggatagattggacaagtcgtatcaacttatgcacggagtgata
gaagaatttcggaaaatactgagagaaaaaacatctggttacgatgataatcaaataaat
gttctattaacaagaataaagaataatgaagcaaaattaaaagaatcaaagaaaaggctg
aaagaagtacttgtacaagtctctcaaaagactgagactttaatcgagcttgagcaacaa
attgatattctcgaacccaaagtggcaaaactctcagaaatcaagtcccttgaatcaacc
ttgttgagatattttaaggaacgatcaaatttaataaagaaagaaatagacaactcaacc
cgaatgattagggatattcgaaagtcccttgaaattttaaaagacaaagagcgaattttc
attacaatacaaatgattgcagcagagaaagaagaattgaataataggataaatatggta
gccgaggagataggcaaactcgaaggattttcagaatgtgcacaaaaaatccaaatagta
gatgggaaatgtccaatttgcaattcaaaaatcgtttccattaatcatatgtttgatatc
tcgcatattacaaaacaactacaactaaagctaaatgagaaaaagtcgttactttccgaa
ctgacaaatcttaatagggaagaatactctttgaaaaaaagggagaaagaaatcattgaa
gcagatcggactctattaaattatgattatagtccgcaattagatattgaaagaatggag
gccaacttgagcaagttaaatgccgaatatcttgaaacttcaaggctatctgtagaagga
ttagatggaatcgaccttgctggatataaattggacaaatactcttccaatttaatagat
cagattaaccatttacgaagtagtgtatcagatgtagatttggaaacttttcagcaaaaa
aaatctcttagaaacgctctatcaagggaaatgatcaatgtccataaccaaaaagcggta
attgaaaaaacgattttggatatcgagaaagagaattctgatatcagtaaaataatatct
gagttgcaatctgtgtctacctttctttctgatctcgaaaagatacgttctactgttttc
aatagagatggattggtcagctcgagccttagaacaagggctttgagtttgatatctgaa
aaagcttccgaatatattcagatatttaatgtaggactttcacgaataactctagttgaa
aagcctcgagagataaaagtgatttgttatggcaaacgaggggaaattgatacagtctcg
ttgagtggtggtgaaaaagttgcggtatctcttgcgattaggatgggaatagcatttcta
atgggtgcgtcaaagatagatttcataatcttggatgaacccacaaccaatttggatgag
gaaaggcgtcgaacctttgtaaagattatttccgaagtatttaacaaaggaacggggccc
ctaaaccaattaattattattacacatgatgaggagatttttgaaaattcagaaatagaa
caagtctataaatttcaaatgaccgagagaggatcactagttaaagctatttga
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