Candidatus Nitrosocosmicus franklandianus: NFRAN_0935
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Entry
NFRAN_0935 CDS
T05935
Name
(GenBank) Exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfn03400
]
NFRAN_0935
DNA repair and recombination proteins [BR:
nfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NFRAN_0935
Archaeal homologous recombinant proteins
NFRAN_0935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
VFJ13257
UniProt:
A0A484IAL7
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All DBs
Position
NFRAN:complement(847328..848605)
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AA seq
425 aa
AA seq
DB search
MLISHISDIHLGYAQYNLQEREEDLYEVFEESIEKSIKEHVRAIILAGDIFHNPKPNGAP
ILRLARELKKLRDRSIPVLFILGEHDISRSNDVPLPYLFHNLGLARRLKADSPIEMEGVL
IYGFNKERRSNVENGLLKPFRILESRIKNDDQRYSIENKKPRKMLVLHQGLNDFNKFAGE
ISSSDLPSGFDYYAMGHYHDHIEKRFPNIGNGLVAYPGSIDLGHSEPISNVEKGFLIVDV
SESSASINTHWIKLERRRPQLSFRIDYSDLSTFLNSILEESSGYSKKPIIDLQIVGTDID
QKILSRTLMPLENTTLHYNWNLLDTESSKSSSYSYDRDKEFDMDIEMSKLIQKTLDSKPL
TDLSLDLIRAFNDDYSQNYNDVLDRSNKEEIAKMLWKFYESNRFLYDTQKIDANSSTQSK
KNEDE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttgcttatatctcatatttctgacattcatttaggatatgcccaatacaatcttcaggaa
agggaagaagatttatacgaagtatttgaagaatccattgagaaatccatcaaagaacac
gtaagagctataattctagcaggcgatatatttcataatcctaaaccaaatggtgcccca
atacttagattggctcgggaattaaaaaaactaagggacagatcgattcctgtcctcttt
attttgggcgaacatgatataagcagatccaacgatgtccctttgccgtatttatttcat
aatttgggattagctagaagactaaaagcggattcacccatcgagatggagggagttttg
atttatggattcaataaggaacggagatcaaacgtagaaaacggcttgttgaaacctttc
agaatcctcgagtctagaataaaaaatgatgaccaaagatattcaattgaaaataagaaa
cctaggaaaatgctcgtactccaccaggggctaaatgatttcaacaaatttgcaggagaa
atttcatcgagtgatttaccttcggggttcgattattatgcaatgggtcactatcatgat
catattgaaaaacgttttcctaacattggtaatggtttggtcgcatacccgggatcgatc
gatctaggtcacagcgaaccaatatctaatgtggaaaagggatttttaatcgtagatgtt
tcagaaagttcagcttctattaatacccattggattaagttggaaaggaggcgacctcag
ctttcatttcgaattgattactctgatttaagcacatttctcaattctatcctagaggaa
tcgtcagggtattcaaagaaacccataatcgatctacagatagttggtactgatattgat
caaaaaattttatccagaacattgatgccgttagaaaatactactcttcattataattgg
aatttattagatactgagagttcaaaatcttccagttattcatatgatagagataaagag
ttcgacatggatattgaaatgtcgaaattaatacaaaagacattggattcaaaaccttta
actgacttgtccttagatttaattcgagcgtttaacgatgattactctcaaaattacaat
gatgtcctagataggagtaataaagaagagatagctaaaatgttgtggaaattttatgaa
tctaacagattcttatatgatactcagaaaatagatgccaatagtagtacccaatctaag
aaaaacgaggacgagtga
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