Candidatus Nitrosocosmicus franklandianus: NFRAN_1196
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Entry
NFRAN_1196 CDS
T05935
Name
(GenBank) Virginiamycin B lyase (modular protein)
KO
K18235
virginiamycin B lyase [EC:4.2.99.-]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
nfn01504
]
NFRAN_1196
Antimicrobial resistance genes [BR:
nfn01504
]
Gene variants
Macrolide resistance genes
Others
NFRAN_1196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vgb_lyase
DUF5074
Motif
Other DBs
NCBI-ProteinID:
VFJ13518
UniProt:
A0A484I705
LinkDB
All DBs
Position
NFRAN:1056904..1058130
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AA seq
408 aa
AA seq
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MYIYDHFKLIITLFLVVSGISLAGTSLLKNTLLGYDEEMLFNYNYKYNSNTDIQNNLEPD
SEFRDFIYVSLYSELVSNSHNCIPNSNTTIREAYNQCITIREYPVPEGSRPHDVAPSTSM
SYTNSNVSKNLLKDIVWYTAQSSSELGKLNTTTGETSHISLGEGSAPHGVIAGPDGAAWI
TDGGLNAIVRVDPLTENITIYTLPEGVGYANLNTATFDNNGTLWFTGQSGIYGRLFPSTG
TIEIFNAPRGPGPYGITTTPNGSVYYASLAGNYIGLIDTRTGQVTVLEPPTPDQGARRVW
SDSYGKIWISEWNAGQLGMYNPQTDQWKEWKLAGKNPKPYAVYVDSKDMVWISDFGSNSM
FSFDPLNETFSKFEIPSPQANVRQILGIEGQIWGAESGTDRLLIIKTN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtatatatatgatcatttcaaattaatcatcactctatttcttgttgtatctggtatc
agtttggcgggtacatcgttattaaaaaacactctacttgggtacgatgaggaaatgctg
tttaattataattataaatataatagcaacacagacatccaaaataatctcgagcccgat
tcagagtttagagatttcatatacgtctcattatactctgaactagtatcaaatagccac
aactgtattccgaattcgaatactactataagagaagcatacaatcaatgcattacaata
agagagtatccagtccctgaaggttcaaggcctcatgacgtagctccttctacgtcaatg
tcctacaccaatagcaatgtttcaaagaatctgttaaaggatattgtatggtatacagca
caatcttctagcgagcttggaaagttaaatactactactggagaaacctcacatatttct
ctaggagaagggtcagctcctcatggtgttatagcaggtcctgatggggcagcatggatt
actgatggagggctaaatgcaattgttcgagtagatcctcttacagaaaatattaccatt
tatactctcccagaaggtgttggatatgcaaaccttaatactgctacattcgacaataat
ggaactttatggtttacaggacaaagtggaatatacggaagactgtttccatccacagga
actatagaaatttttaatgcaccaagaggaccaggtccttatgggatcacaactacacca
aatggatcagtatactatgcatcacttgcgggcaattatataggactcatagatacaaga
accgggcaggtaacagttttggaacctcctacaccagatcagggagcaagaagagtatgg
tctgattcttatgggaaaatttggatatcagaatggaatgcaggtcagttaggaatgtat
aatccgcaaacagaccaatggaaagaatggaaactcgcaggaaagaatcccaaaccatat
gcagtatacgtagattcaaaagacatggtatggataagcgattttggttcgaactcgatg
tttagcttcgatcctctaaatgaaaccttcagcaaatttgagatccccagtccacaagca
aacgtaagacagattcttgggatagagggtcaaatctggggagctgaatccggaaccgat
cgcttgttgattataaagacaaattaa
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