Candidatus Nitrosocosmicus franklandianus: NFRAN_1393
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Entry
NFRAN_1393 CDS
T05935
Symbol
rnz
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfn03016
]
NFRAN_1393 (rnz)
Enzymes [BR:
nfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NFRAN_1393 (rnz)
Transfer RNA biogenesis [BR:
nfn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NFRAN_1393 (rnz)
Prokaryotic type
NFRAN_1393 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
VFJ13715
UniProt:
A0A484ICE0
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All DBs
Position
NFRAN:complement(1212338..1213267)
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AA seq
309 aa
AA seq
DB search
MVSLEVTFLGTSAAMPTVDRSLSSVVVNRNGTLHIFDAGEGMQYNFIRASLGFNKRTMLF
ITHLHSDHILGILGFLQTLSLQGRTMPIDIFGPEPLYDFIIENFRLLNVNLTFQINIHKI
LDSQGTLVEEKEYKILYCKSEHGPGICSYAYCLLENDRPGKFDIRKAKELGIPEGEMYGL
LQKGFDIVDKNRVIHSSEIVGQKRPGRKIGISGDTRPSENLCSFFRNCDLLIFESTFSIN
ELTKAKESYHSTALETATLAKMASVQRLCLTHFSSRYKDLNVLLNEARSVFLSTEIAFDL
KLIRVDYRS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtcttgaagtaacattcttggggacatctgctgcaatgccaacagttgaccga
tctctttcctcggtagttgtaaatagaaatggaactcttcatatctttgatgcaggagaa
ggtatgcagtataattttattcgagcaagccttggtttcaataaaagaactatgctattt
attactcacttacactctgatcatattttgggtattttaggttttctccaaacgctctca
cttcaaggtaggactatgcctattgatatttttggtccagaaccgttgtatgattttata
atagagaactttagattgctgaatgtcaatttgacttttcaaataaacatacataagatt
cttgattctcaaggaacgttggtcgaagaaaaagaatataaaatattgtattgtaaatcc
gaacacgggcctggtatttgctcttacgcttactgtctacttgaaaacgatagacccgga
aaattcgatataagaaaagctaaagaactcggtattccagaaggagagatgtatggttta
cttcaaaaaggatttgatattgtagacaagaatcgggtaattcattctagtgaaatcgtt
ggtcaaaaaagacctggtagaaaaattggtatttcaggagacactcgtccatctgaaaat
ctttgcagtttctttagaaattgtgatttactgatatttgagtctactttttcaattaat
gaattgaccaaggcaaaggaaagctatcattcaacagcacttgaaaccgcaaccttagca
aaaatggcctcggttcaacgattatgcctgactcattttagtagcaggtataaagaccta
aatgttttattaaacgaggcgcgttctgtcttcttatctactgaaattgcatttgattta
aagctcatccgagttgactatagatcttga
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