Candidatus Nitrosocosmicus franklandianus: NFRAN_1703
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Entry
NFRAN_1703 CDS
T05935
Symbol
fen
Name
(GenBank) Flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03030
DNA replication
nfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFRAN_1703 (fen)
03410 Base excision repair
NFRAN_1703 (fen)
03450 Non-homologous end-joining
NFRAN_1703 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfn03032
]
NFRAN_1703 (fen)
03400 DNA repair and recombination proteins [BR:
nfn03400
]
NFRAN_1703 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfn04147
]
NFRAN_1703 (fen)
DNA replication proteins [BR:
nfn03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NFRAN_1703 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NFRAN_1703 (fen)
DNA repair and recombination proteins [BR:
nfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NFRAN_1703 (fen)
Exosome [BR:
nfn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NFRAN_1703 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
DNA_pol_lambd_f
Dehyd-heme_bind
Motif
Other DBs
NCBI-ProteinID:
VFJ14025
UniProt:
A0A484IB63
LinkDB
All DBs
Position
NFRAN:complement(1498450..1499478)
Genome browser
AA seq
342 aa
AA seq
DB search
MGLNLKPLVISNPIRISDLVGKVVAVDAFNVIYQFLATIRGPTGDLLTDTHGEPTSHLSG
LFYRNINLLCDGVKMVYIFDGEPHELKAKEINRRKKAKEEASEKYNLAIEEGRMDDAKKF
SQGTSILTSKMIEESKYLLSLLGIPYINAISEGEATAALLSKKDLAYSCVSQDYDSILFG
AKRLIRNLTISGKRKIPNKNAYIDIVPEIIEYDQVLKINNITHEQLVDIGILIGTDFNPN
GFNGIGPKNALKLIQKYKKLEDIEKIKDELSNTPYKEIREIFLNPNVANIEDLNIQFKDL
EKEKILKYLCDEKSFSMERVANYLRRLEKNVIKKSESLDKWF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaatttgaagccactggttatttctaatcctattagaatttccgatttggtt
ggaaaggtagtcgcggtcgatgcatttaatgtaatttatcaattcttggcaacgatcaga
ggtccaactggagatttacttacagatactcacggagaacctacgagtcatcttagcgga
cttttttataggaacataaatttactttgtgacggagttaagatggtatatatttttgac
ggggaaccccatgaattgaaagccaaagaaatcaatagaaggaaaaaggctaaggaagaa
gcttctgaaaaatataatctggccatagaggagggaaggatggatgatgcaaaaaaattt
agtcagggtacttcaattttaacttccaaaatgattgaggaatcaaaatacttgttatcc
ttactgggaattccatatataaatgcaatatctgaaggagaagcaactgcagcattgttg
tcaaagaaggatctggcttactcgtgtgtaagtcaagattatgactctatattgtttggt
gcaaaaagattaataagaaatttgactattagtgggaaacggaagatcccaaataaaaac
gcgtatatagatattgtccctgaaatcatagaatatgatcaagtcttaaaaatcaataat
ataacccatgaacaactagtagatattggaatccttattggaaccgattttaatcctaat
ggatttaatggcattggtcctaaaaatgctttaaaactaattcaaaaatataagaaactc
gaggatatagaaaaaataaaagatgaattatcaaatactccatataaggaaattagagag
atttttttgaatcctaatgttgctaatattgaggatctaaatatccaatttaaggattta
gagaaagaaaaaatattgaaatatctttgcgatgagaaaagtttctctatggaaagagtt
gctaattacctaagaagactggaaaaaaatgttataaaaaaaagcgagtctcttgacaaa
tggttttga
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