KEGG   Candidatus Nitrosocosmicus franklandus: NFRAN_1753
Entry
NFRAN_1753        CDS       T05935                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
nfn  Candidatus Nitrosocosmicus franklandus
Pathway
nfn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NFRAN_1753
   03460 Fanconi anemia pathway
    NFRAN_1753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nfn03032]
    NFRAN_1753
   03400 DNA repair and recombination proteins [BR:nfn03400]
    NFRAN_1753
DNA replication proteins [BR:nfn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    NFRAN_1753
DNA repair and recombination proteins [BR:nfn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     NFRAN_1753
SSDB
Motif
Pfam: ERCC4 HHH_5 HHH HHH_2 HHH_3 HHH_8 RecR_HhH 5_3_exonuc UPF0758_N
Other DBs
NCBI-ProteinID: VFJ14075
UniProt: A0A484IBB5
LinkDB
Position
NFRAN:1536728..1537528
AA seq 266 aa
MFFIVLLAIRIVVDEREKNSRVPDLLKLMGVYVDYKQLTIGDYIVSSETVIERKTVYDLL
NSVYDGRLFIQCSDIIKHYSKPIIVIEGNLTDLDTREDISSDSRLIVDKLRIAYETLIKL
ALDFRLPILYTSSVYYTAELLVLLASNQFKSKNAGPLLKKIKKTNPFVTQQLYVLASLPG
IGSKVAVRLLEKFHSPRNVLNASIAELARVPGIGNMRAEKIRKILDTCVSPTMNTYTQKK
LIMENTDDEDTTTTFSSSSSSNDNSI
NT seq 801 nt   +upstreamnt  +downstreamnt
ttgttttttattgtactattggctattagaattgtagtagatgagagagagaaaaatagt
agagttcctgatctgctaaaactaatgggagtttatgttgattataaacaattaacaatt
ggagattatattgtttcatcagaaactgtaattgaaagaaaaactgtctacgatttacta
aattccgtttatgacggtcgcttatttatacagtgttctgatataataaaacactattct
aagcccataattgttatcgagggaaatttaacagatcttgatacccgagaggatatttca
tccgattctaggttaatagtagataaactgcgtatagcttacgaaaccttgataaagcta
gcacttgattttcgattaccgattttatatactagttcggtctactatactgccgaacta
ctcgtcttattggcctcaaaccaatttaaaagcaagaatgccggtccacttttaaaaaag
attaagaaaaccaatccatttgttactcagcagttatatgttcttgcttctttacctgga
ataggttctaaggttgcagtcagattgttagaaaaatttcattctcctagaaatgtttta
aatgcttcaatagcagaacttgccagagtacctggaattggtaatatgagggcagaaaaa
attagaaaaattttggatacatgtgtttctcctacaatgaatacctatactcaaaagaaa
ctaataatggaaaatactgatgatgaggatactactactactttttcatcctcatcctca
tccaatgataattctatataa

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