Candidatus Nitrosocosmicus franklandus: NFRAN_1776
Help
Entry
NFRAN_1776 CDS
T05935
Name
(GenBank) Cell division cycle protein 48 homolog AF_1297
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nfn
Candidatus Nitrosocosmicus franklandus
Pathway
nfn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NFRAN_1776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfn03019
]
NFRAN_1776
03009 Ribosome biogenesis [BR:
nfn03009
]
NFRAN_1776
04131 Membrane trafficking [BR:
nfn04131
]
NFRAN_1776
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfn04147
]
NFRAN_1776
Messenger RNA biogenesis [BR:
nfn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NFRAN_1776
Ribosome biogenesis [BR:
nfn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NFRAN_1776
Membrane trafficking [BR:
nfn04131
]
SNARE
SNARE associated proteins
Others
NFRAN_1776
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NFRAN_1776
Exosome [BR:
nfn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NFRAN_1776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
AAA_16
AAA_2
TIP49
CDC48_2
AAA_14
AAA_22
AAA_33
AAA_5
RNA_helicase
AAA_28
Sigma54_activat
NPHP3_N
AAA_7
Mg_chelatase
IstB_IS21
nSTAND3
ATPase
ATPase_2
Bac_DnaA
NACHT
AAA_24
Zeta_toxin
NB-ARC
ABC_tran
TsaE
DUF815
AAA_lid_PRS2_C
PhoH
Parvo_NS1
AAA_18
Cytidylate_kin
AAA_17
DUF5906
AAA_3
SLFN-g3_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
VFJ14098
UniProt:
A0A484IAF4
LinkDB
All DBs
Position
NFRAN:1560417..1562612
Genome browser
AA seq
731 aa
AA seq
DB search
MTLCIVIMSQNTISLKVLEAYTRDVGRGVARIDYDSMDALSASTGDVVEIRGKRKTVAKC
LPLYPSDEGKGIIRVDGLVRNNAGVAIGDTVIVRKIKAVPAEKVIVAPLEAIPPIDERYL
ADALESVPLIKGDNVMVPYFGGRLTFQVIGVTPGPGVDAVLVTQKTVFHIAERGETLRGV
PQVTYEDIGGLKEEAQKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAV
ANESNAHFVSISGPEIMSKFYGESEARLREIFKETKEKAPSIMFIDEIDSITPKREEVTG
EVERRVVSQLLSLMDGLEARGKVIVIAATNRPNAIDPALRRPGRFDREIEIKVPDKRGRL
EILQIHTRNMPLDTDVNQEKIASVSHGFVGADLEYLCKEAAMKCLRRLLPELNLEDEKIN
PDVLNKLVVTMADFENAIKEVMPSAMREVYLESPDVQWTDIGGLDEVKRELQEAVEWPLR
YPDLYTKLGHSNPKGILMHGPSGTGKTMLAKAVATESEANFISVKGPELLSKWVGESERG
IREIFRRARQAAPCVVFFDEIDSIAPIRGLGGDSMVTERVVSQLLTELDGIQELSSVVII
AATNRSDMIDPALLRPGRFDKIVYVPLPDKVTRKKILEIHASQKPISEVVDFDRIAELTD
GFSGADMSAVANTAISLVLHEYLQKYSNPEDAAKHASEAHVTMKHFEDAVKKIKTQRDSK
SGEKVTVPYYR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacgttatgtattgtaatcatgagccaaaacaccatatcactaaaagtgcttgaagcc
tatacccgagatgtaggtcgtggtgttgctagaatcgattatgattctatggatgcttta
agcgcttctacgggtgatgtagtggaaataagaggtaaacgcaaaacagttgcaaaatgc
ttgcctctttatccttcagatgagggtaagggtatcatacgagttgatggtctggtcaga
aataatgctggtgtagccattggtgacaccgtgattgtccgaaagattaaagcagtgcct
gcagaaaaagtaattgtagcaccattagaagctattccaccaattgacgaacgatatctc
gctgatgctctagaaagtgtaccgttaataaaaggtgataacgtgatggtgccatacttt
ggtggtagacttacttttcaagtaataggagtaaccccaggtcctggtgttgacgctgtt
ttagtcacacaaaaaactgtatttcatatagctgagcgtggagaaacgctccgtggagtg
ccacaagtaacctacgaggatattggaggtttaaaggaagaagcccagaaggttcgagaa
atgatagaacttccactcagacatcctgaaatatttgagaaattgggtatagaggcaccc
aagggagtattgctatatggtccgccgggtactggtaaaacactgctggcaaaggctgta
gcaaatgaaagtaatgctcactttgtgagtatctcgggtccagaaataatgagtaaattc
tacggtgaatcggaagcaagattacgtgaaatattcaaagaaaccaaagaaaaggccccg
tctatcatgtttatagatgaaatagactctattactccaaagcgtgaagaagtaacggga
gaagttgagagaagagttgtatctcaattactatcattaatggatggattagaagcaaga
ggtaaagtcattgttatcgctgctacaaacagaccaaatgctattgacccagctttaaga
agacctggtagatttgatagagaaattgaaatcaaagttccagataaacgtggaaggtta
gaaatcttacaaattcacacgagaaatatgcccttggatactgatgtaaatcaagaaaag
attgcatctgtaagccatggttttgttggtgccgatttagaatacctttgtaaagaagct
gcaatgaagtgtttacgtagattactaccagaacttaatcttgaagatgagaaaattaat
cctgacgtgttaaataaattggttgttacaatggccgattttgaaaatgcaattaaggaa
gtaatgccctcagctatgagagaagtatatctcgaatctccagatgtacagtggactgat
atcggtggactggatgaagtcaaaagagagctgcaagaggctgtagaatggccgttaaga
tatcctgacttgtatacaaagttaggacactctaatcctaaaggaattcttatgcatggt
ccatctggtaccggaaagaccatgcttgctaaagctgtagcaaccgaatcagaagctaat
tttatcagtgttaagggaccagagttattgtcaaaatgggtgggagaatcagaaagaggt
atcagagaaatctttagacgtgcaagacaggcagcaccatgtgttgttttctttgatgaa
atcgactctatagctccaattagaggcctaggtggagatagtatggtaaccgaaagagtt
gtttctcaacttttaaccgaattggatgggatccaagaattaagcagtgtagtaattatt
gctgcaactaatcgttcagacatgatagatccagctttattaagacctggcaggtttgat
aagattgtgtacgttccgttacctgataaggttactaggaaaaagattttggaaattcat
gcaagtcaaaaacccatctcagaggtggtcgattttgatagaattgccgaacttactgat
ggattcagtggtgcagatatgtctgctgttgcaaatactgccatatctttagtcttacat
gaatatcttcaaaaatatagtaatcccgaagatgctgcaaagcatgcgtcagaagcacat
gtaactatgaagcattttgaggatgctgtaaagaagataaaaactcagagagatagtaaa
tcaggagaaaaagttacagttccttattatagataa
DBGET
integrated database retrieval system
